Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1997 ATGAAGTTCTGCAAGAAATACGAGGAGTACATGCAAGGCCAGCATAAGAAACTCCCTGGAGTTGGCATCAAGAAGCTTAAGAAGATATTGAAAAAATGCAGCAGAGACTGCCGATCCCGCAAAGGTCTCAATGAAGCCATTGCCGTCCGAACCTGTCGCGACCAATGCCCAGAAGTTCCGAAGGATTTTACATCCTGTTATGAAAGATCTGATGATCTAAATGGGGAGAGAGGAGTTTCTTTAATGTTCATAAAGTACTTTTTCTGGTTAAAAGGCAAATTACCTGGAAAACAAACTGCCCTCGTTCAAGAAGGCGAAGACCTGGTTATTTATGCTCTAATTAATGCCATTGCAATTCGAAAGATACTCAAGAAATATGATAAGATTCATTATTCAAAGCAAGGACAATTATTTAAGTCACGAGCCCAGAGTATGCACATGGAAATTCTTCAGAGTCCCTGGCTTTGTGAGCTCATGGCCTTCCGCATCAATTTAAGTGAAAACAAGAACAAATCAATGAAGAAGCCACCTGCTTTCTTTGATGGATGTTCCCTCACATTTAAGGATGATAAACCATCACTTACTTGTGAGCCATTTGATTCCATCAAACTTGATATTGACTTGACTTGTTCTATATGCTTAGATACAGTGTTTGATCCAATTAGTCTTACTTGTGGTCACATATTCTGCTACATGTGCGCTTGCTCATCTGCATCAGTAACTATTGTTGACGGACTTAAGGCAGCAAATTCTAACGCAAAATGTCCTCTATGCCGAATGGGAGGAGTCTATCAAGGTGCCATGCGCTTGGAAGAATTAAATATTTTGTTAAGCCGAAGCTGCAAGGGATACTGGGAACAAAGGCTTCAAACAGAGAGGGTCGAGAGGGTTAAGCAAATAAAAGCGCATTGGGAATCGCTTAGTAGGGCATTTGTGGGCGTCTAA 945 0.4116 MKFCKKYEEYMQGQHKKLPGVGIKKLKKILKKCSRDCRSRKGLNEAIAVRTCRDQCPEVPKDFTSCYERSDDLNGERGVSLMFIKYFFWLKGKLPGKQTALVQEGEDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSRAQSMHMEILQSPWLCELMAFRINLSENKNKSMKKPPAFFDGCSLTFKDDKPSLTCEPFDSIKLDIDLTCSICLDTVFDPISLTCGHIFCYMCACSSASVTIVDGLKAANSNAKCPLCRMGGVYQGAMRLEELNILLSRSCKGYWEQRLQTERVERVKQIKAHWESLSRAFVGV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1997 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 313 IPR033326 -
Lele14g1997 314 ProSiteProfiles SPX domain profile. 1 140 IPR004331 -
Lele14g1997 314 ProSitePatterns Zinc finger RING-type signature. 225 234 IPR017907 -
Lele14g1997 314 SMART ring_2 210 258 IPR001841 -
Lele14g1997 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 310 IPR013083 -
Lele14g1997 314 ProSiteProfiles Zinc finger RING-type profile. 210 259 IPR001841 -
Lele14g1997 314 Pfam Zinc finger, C3HC4 type (RING finger) 210 258 IPR018957 GO:0046872
Lele14g1997 314 SUPERFAMILY RING/U-box 203 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1997 Lele-ChrLele14 26081362 26084319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1997 207 259 C3H Transcription Factor Family AT4G28270 39.655 3.74e-07 48.1