Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1982 ATGATGGAGGTTTTGAAAGACGAGTTTTCAGAGCTAGAGATTGGGAATTCAGTGGAGTCGTTCCAGAAATTTCTGGTTTCGCAAAGGGAGCTCTTTCATAGCCAGATCGATCAGCTTCAGAAGATCGTCGTTACGCAATGCAAACTCACTGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATTGGAAAAAGACCCAGGGATTTGTTAAACCCAAAAGCTGTAAATTACATGCAATTAGTTTTCTCCATTAAAGATGCAATCAGTAAGAAAGAATCTCGTGAGATTAGTGCTTTATTTGGTATCACAGTGACACAGGTTCGCAAATTTTTCAACAGTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTGTCAGGTGAAAGGGTGGTAAGATCTAACTACTGTGAAGAACCTCGTGATGGGTTCCCAATAAACTCTGATTCTATGATACCAATTAATCCAGCTCCCTTAAACTCTGCCGGTCCCATCAGCGAGGATGAAGCTTCTCGTTCAACACAGGAAAATTCATTTTCTGGCCTAAATGGCTCAGAGAAACATTTTGTTGATAATATTTTTAATTTAATGCGGAAAGAGGAAACATTTTCGGGCCAGGTGAAATTGTTGGAGTGGATATTGAAGATACAGAATGCTTCAGTATTAATTTGGTTTTTAGGCTGTGGAGGTGTGATGATTTTAGCAGCGTGGTTGAATGAAGCAGCTGTTGAAGAGCAAACAAGTGTTCTTCTTCTTATTTTAAAGGTGCTTTGTCATTTGCCTCTGCATAAGGCCCTTCCTACGCATATTTCAGCTACATTGCAGTGTGTTAATAGACTTCGGTTTCACAGGATACCAGATTTATCAAACAGGGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCGAAGAACCAAGCAATAAAGAAAACCGCTGGTCTTAAACCTGGTAGCGAGGCTCTAAAGGAGATGGAGGACATTCTTGCCCTTTCAAATGAAGGTTCAGATGATTTCAGGAAACCAGAAGCTCTACAAGGTGTGAAATTATTGACAGCTTCTTCAGATGATTCTCTTAAGAAGTCTGTCCTAGGTGTATCAATGTCTCAGACTAGAGAGCGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGCCAAAAGACAGTTAGCAGAAGTCCTCAAGCTGCAAGAGTAGGGCCTGTAAATCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTATATTTAAGCAAAGCAAATATGGGAAACCTGGTTCATCTAAAGGAAATAAAGAAGCAAAGACTGATGGTCTGAATAAACCTCATACAAATCAGGCCGGTCTTGGGGCTTCCTTATCTAAAGCTCCTGTATCAACCAAAACTGATGAAGATAGCAAACCTCTGTTGCTTCCTTCTAAAACTTCTAATATGAAGGATGCTTCTTCTGAATCATATTCGAGCATGGATTTGAAGGAACCTTTCTGGGAGAAATGCAAGCAGGTGCAAATCTCGTGGAAGACACCAGCAGAGGTGAAACTTAACGATACCTGGAGAGTTGGTGCTGGTGAAAACAGCAAAGAGGTTGATGTTCAGAAAAGTAGAAATCGAAGAGGGGAGGAGATAATTTATCGGACTATCCTGGAGATACCACTTAATCCCAACGAGCCATGGGACCTCGAAATGGACTACGATGACACATTGACCCCACCAATTCCTATTGAACAGCCTCCTGATGTTGATGGTGCAGAAACACCAGCTCCCGCTAATGAAGGTATTCAAGTGACGACCCCTTCATCTTCCAACGCTAATGCAAATGTTGCTGAGCCTGATCTGGAGCTGCTTGCTGTACTTCTTAAAAATCCCGAGTTGGTGTTTGCTTTGACTTCTGGGCAAGTTGGTAGAATACCGAGTGAGGAAACGGTAAAACTGCTTGACATGATAAAAGAAGGAAGTGTCCATTTGGCTGACAATGGTGGTACAGCGCAGGAGATGGTGGAAGTTTCTCTTCCTTCTCCAACTCCTTCTAACGATCCAAGAACGAGTGGGTGGACGTCAGAAGTTGCAAAGAATCCTTTTTCGCGCCACAACTCGGTGCCTGACAGAAGTATCAGCTTTCCAGCAGCTGCAACCCACATCATGGTATTGCCTCAGGTTCCAGCATCCCCTAACGTTGTTTCTGGCATCGCAGCACGACAACATCAAACTGATTCACTGTCTCAAGCACCTAATGTTGTTTCTGCATTTTCCTCTCTGCATCAGTCTCTGCTCACCAATTTTCCAACAACACAAATGCTATCATCAAACATAGGCCTGAATGGTCAAGACAACTGGGTTCTTCTGGTCACCGGGATCCAAATAGACAAGGAAGCAGGAAGTGGCATGATCAGAGGCGATGATCTTAGTGTTCAGCTTGATTTGTGTCTTGACTTTGTATTGCTTTCTAAATCATCAAGGGATTTAGATTCAGCAATCTCAATCCCATATATAGAACCTGTATCACAAGGCTTTCATCACGTATCAGCGAATCTTCATCGATCTGAGTCTTCCTTGTTATTCTCTAATCATCCTGTACTCAAAATTATTATGAGATGGCATATGCGACATTCTCATGGGGATCATGAACATCAGCACCTCCTCCTTCAAAAGGAAGGAGAGAACATTTTTAGGTTGGGTCTGTTCGCTGACATTGGTTTAGCCACTAGAAAGGCCTTTGTCGATTATCTTTCTGGAAGTACCGCCATAATCGCTGATGCTGCCCATTCCATATCTGATTGTGGACATGGTAAGTTTGAGACTCTCGGAGCTCTTGGAATCTCGTGTATGCTTCTGGCGACCGGTGGTGGCATTACATGGCACGCTATCGATATCCTGCTGTTATTGGCACATGTGCATTTGCATGGCCACCAGCGTGGTGGACATCATTATGGAATTGACATGGATCACCCTGTTCTAGCTCTGAATATGGCTATTGTGTCTATAAGAGGCTCCATCCATCCTTGGCGTGAAGTTTCTAGATCCTCTTGCAGGACTTCTTGTCTCTGGCATGATTCTAAAAGCTGGAGCCGAAACTGTTCTGCACGGGGTTTCCATCACTTGAGAGGAAGGAGAGCTGGTTCATCTTTATATCTTGATGTGAATATTGAGGTTGATCCTTTTTCTAGTGTGAGTGCAGCAAATGACATTGGGAAAAATGTCCGTCATCATACGCACAAGTCCCCTCCGACCGGGGCTGAAATTTTCATACACATCGATCAGCAAGATACATGGAGCGATGATATGGATCAAAACTGCATCATCCCTACTGGACATATAATATTGATAAGACTGTTTCTGACATCATCTCATCAAACTTCGTACAGATGTCAGTGGAACAGAAATGAAATGGAAGTAGCAGAGGAAGCAGAGAAAGAGGTGTTGAAGGCTGTCTCGGATGTTACGCATGTCAGCATTCAGCTACGACTAGGGAGACCAATTCCACAGTTGAATCATTCATAG 3519 0.4325 MMEVLKDEFSELEIGNSVESFQKFLVSQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLVFSIKDAISKKESREISALFGITVTQVRKFFNSQRSRVRRQVRLSGERVVRSNYCEEPRDGFPINSDSMIPINPAPLNSAGPISEDEASRSTQENSFSGLNGSEKHFVDNIFNLMRKEETFSGQVKLLEWILKIQNASVLIWFLGCGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISATLQCVNRLRFHRIPDLSNRARVLLSKWSKLLAKNQAIKKTAGLKPGSEALKEMEDILALSNEGSDDFRKPEALQGVKLLTASSDDSLKKSVLGVSMSQTRERRKVQLVEQPGQKTVSRSPQAARVGPVNQGRPMSADDIQKAKMRAIFKQSKYGKPGSSKGNKEAKTDGLNKPHTNQAGLGASLSKAPVSTKTDEDSKPLLLPSKTSNMKDASSESYSSMDLKEPFWEKCKQVQISWKTPAEVKLNDTWRVGAGENSKEVDVQKSRNRRGEEIIYRTILEIPLNPNEPWDLEMDYDDTLTPPIPIEQPPDVDGAETPAPANEGIQVTTPSSSNANANVAEPDLELLAVLLKNPELVFALTSGQVGRIPSEETVKLLDMIKEGSVHLADNGGTAQEMVEVSLPSPTPSNDPRTSGWTSEVAKNPFSRHNSVPDRSISFPAAATHIMVLPQVPASPNVVSGIAARQHQTDSLSQAPNVVSAFSSLHQSLLTNFPTTQMLSSNIGLNGQDNWVLLVTGIQIDKEAGSGMIRGDDLSVQLDLCLDFVLLSKSSRDLDSAISIPYIEPVSQGFHHVSANLHRSESSLLFSNHPVLKIIMRWHMRHSHGDHEHQHLLLQKEGENIFRLGLFADIGLATRKAFVDYLSGSTAIIADAAHSISDCGHGKFETLGALGISCMLLATGGGITWHAIDILLLLAHVHLHGHQRGGHHYGIDMDHPVLALNMAIVSIRGSIHPWREVSRSSCRTSCLWHDSKSWSRNCSARGFHHLRGRRAGSSLYLDVNIEVDPFSSVSAANDIGKNVRHHTHKSPPTGAEIFIHIDQQDTWSDDMDQNCIIPTGHIILIRLFLTSSHQTSYRCQWNRNEMEVAEEAEKEVLKAVSDVTHVSIQLRLGRPIPQLNHS 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1982 1172 MobiDBLite consensus disorder prediction 170 187 - -
Lele14g1982 1172 MobiDBLite consensus disorder prediction 386 400 - -
Lele14g1982 1172 MobiDBLite consensus disorder prediction 167 187 - -
Lele14g1982 1172 Gene3D Cation efflux protein, cytoplasmic domain 1030 1107 IPR036837 -
Lele14g1982 1172 Gene3D - 69 136 - -
Lele14g1982 1172 SUPERFAMILY Cation efflux protein transmembrane domain-like 893 966 IPR027469 -
Lele14g1982 1172 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Lele14g1982 1172 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 1035 1092 IPR036837 -
Lele14g1982 1172 MobiDBLite consensus disorder prediction 476 496 - -
Lele14g1982 1172 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 107 774 - -
Lele14g1982 1172 SMART HOX_1 69 131 IPR001356 GO:0003677
Lele14g1982 1172 MobiDBLite consensus disorder prediction 447 466 - -
Lele14g1982 1172 MobiDBLite consensus disorder prediction 425 496 - -
Lele14g1982 1172 SUPERFAMILY Homeodomain-like 70 131 IPR009057 -
Lele14g1982 1172 MobiDBLite consensus disorder prediction 374 413 - -
Lele14g1982 1172 MobiDBLite consensus disorder prediction 581 610 - -
Lele14g1982 1172 Pfam Dimerisation domain of Zinc Transporter 1034 1092 IPR027470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1982 Lele-ChrLele14 25971184 25983610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1982 2 706 Homeobox Transcription Factor Family AT4G02560 50.314 0.0 676