Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1962 ATGGGCTCCAAGCCGTGGCTGTACCCGGCTCCGACTTATCGAACTCTAAATACTCACTGGGATACCGATGAAGATGCCCCCGGTCCCCGAACCGGCCACACGCTCACCGCCGTTGCCGCCACCAAGACTCACGGTCCTCGCCTTATCTTATTTGGGGGCGCCACCGCCATTGAAGGAGGCTCTTCCTCTACATCCGGCATTCGATTAGCGGGAGTCACAAATTCAGTTCATTCCTACGACGTTGCTACAAAAAAATGGACCAGAATAAGACCCGCTGGCGAGCCGCCCTCTCCTCGGGCTGCCCATGCTGCCGCTGCTGTTGGAACTATGGTTGTTTTCCAGGGCGGGATAGGTCCAGCTGGGCATTCCACCGATGATCTCTATGTGCTCGACATGACCAATGATAAATTCAAGTGGCACAGAGTCGTTGTGCAAGGACAAGGACCTGGGCCTCGCTATGGTCATGTGATGGACTTGGTTGCTCAAAGATATCTTGTCACTGTCAGCGGGAATGATGGGAAAAGAGTTCTGTCTGATGCCTGGGTTTTGGATACTGCTCAAAAACCTTACATGTGGCAGAAGTTGAACCCAGAAGGTGACAGACCTTCTGCTAGAATGTATGCGACTGCTAGTGCCCGCTCAGATGGTATGTTTCTGCTGTGTGGTGGAAGAGACTCTTCTGGAGCGGCACTGGGAGATGCCTATGGACTGCTCATGCATAGGAATGGTCAGTGGGAATGGACTCTTGCACCTGGAGTTTCTCCTTCCCCAAGGTATCAACATGCTGCGGTTTTTGTAGGTGCAAGATTGCATGTTACAGGAGGTGTTCTTAAGGGTGGACGTGCAGTGGAAGGTGAAGCCGCCGTTGCTGTGTTGGACACTGCTGCTGGGGTTTGGCTGGACAGAAATGGCCTTGTGACCACCACCTCACGCACAAGCAAAGGTTATGATCATGACCCTTCTTTGGATCTTATGCGCCGTTGCCGTCATGCAGCAGCTGCTGTTGATGCTCTCATATACATTTATGGCGGTCTTAGAGGAGATACTCTGCTAGATGATTTCCTAGTGGCTGAAAATTCACAACATCGGTCTGAAATTAACTCTCCTGTTTTAACGGCTGAGAGAGCTTCACCTATTGCAAGCCCCAACAGGAACCAATCTAACTTAAATTATGACGTGAACACACCAGGTTTGGGTGACGGGTCAGACATTCACTCATCCGGTGGCATGGGCACCATGGACAAAAACTCCATGGAGAAACTGAGGGAAGCATCTGCTGCTGAGGCTGAGGTAGCAAGTGCTGTCTGGCAAGCTGTGCAATCTGTATCAAGCAGTCAAGCTGAAGAAACATCTGTGTCAGATGACAACTCACAAGCTGCAGAAACAGCTTCAGACGGCAGTGATGTAGAGGGGGATGTTCGCCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGGCCGTGGGTAACCTGGGTGGAATGGTGAGACAGTTATCACTGGATCAATTTGAAAATGAGAGCAGAAGGATGATTCCCATAAATAATGATATGCCATATTCTGCAAAAAAGTTCACCAGGCAGAAATCCCCTCAGGGCTTACATAAAAAGATAATTTCAACTCTGCTCAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCAGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTGTGTTATGCTGCTGAACAGATATTCATGCATGAACCAACTGTTCTACAGCTGAAAGCTCCTGTCAAAGTATTCGGTGATCTTCATGGGCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACTGCTGGAGACATAACGTATATCGACTACCTGTTTTTGGGGGATTATGTTGATCGAGGACAACACAGCTTGGAAACGATCACCTTGCTTCTTGCTCTTAAGATTGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCAGCTGACATAAATGCTCTGTTTGGTTTTCGCATTGAGTGCATTGAGAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTCCCTCTTGCTGCCCTCATTGAAAAGAAAATTATCTGTATGCATGGTGGTATAGGAAGGTCTATCCATTCAGTAGAACAGATAGAAAAGCTTGAAAGGCCCATAACGATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACTGAGAATGATAGCATAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTCACATTTGGGCCTGATCGTGTCACTGAATTCTGCAAGAAAAATAAATTACAGCTCATTATACGAGCTCATGAGTGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAGTTAATAACTCTTTTTTCTGCAACTAATTATTGTGGGACGGCTAACAATGCTGGAGCCATACTGGTAGTTGGAAGGGGCTTGGTTGTGGTTCCTAAATTAATTCATCCCTTGCCCCCTCCCCTTCAGTCTCCTGAAACATCTCCTGAGCGTGTCATGGAGGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCCCCAACCCCTACTCGGGGTCGACCCCAGCCAGACCATGATCGCAGTTCACTGGCATACATATGA 2664 0.4779 MGSKPWLYPAPTYRTLNTHWDTDEDAPGPRTGHTLTAVAATKTHGPRLILFGGATAIEGGSSSTSGIRLAGVTNSVHSYDVATKKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSDAWVLDTAQKPYMWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAALGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRAVEGEAAVAVLDTAAGVWLDRNGLVTTTSRTSKGYDHDPSLDLMRRCRHAAAAVDALIYIYGGLRGDTLLDDFLVAENSQHRSEINSPVLTAERASPIASPNRNQSNLNYDVNTPGLGDGSDIHSSGGMGTMDKNSMEKLREASAAEAEVASAVWQAVQSVSSSQAEETSVSDDNSQAAETASDGSDVEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPINNDMPYSAKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRQFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSIEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMEETWMQELNIQRPPTPTRGRPQPDHDRSSLAYI 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1962 887 MobiDBLite consensus disorder prediction 371 415 - -
Lele14g1962 887 FunFam Serine/threonine-protein phosphatase 521 860 - -
Lele14g1962 887 PIRSF STPPP_BSU1 1 887 IPR012391 GO:0004721|GO:0009742
Lele14g1962 887 SUPERFAMILY Metallo-dependent phosphatases 537 848 IPR029052 -
Lele14g1962 887 SMART pp2a_7 556 842 IPR006186 GO:0016787
Lele14g1962 887 MobiDBLite consensus disorder prediction 861 887 - -
Lele14g1962 887 Pfam Calcineurin-like phosphoesterase 584 791 IPR004843 GO:0016787
Lele14g1962 887 Gene3D - 513 862 IPR029052 -
Lele14g1962 887 Gene3D - 8 194 IPR015915 GO:0005515
Lele14g1962 887 Pfam Serine-threonine protein phosphatase N-terminal domain 535 582 IPR031675 -
Lele14g1962 887 CDD MPP_Bsu1_C 536 838 IPR041758 -
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 652 676 IPR006186 GO:0016787
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 690 716 IPR006186 GO:0016787
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 802 818 IPR006186 GO:0016787
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 780 800 IPR006186 GO:0016787
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 720 747 IPR006186 GO:0016787
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 584 611 IPR006186 GO:0016787
Lele14g1962 887 PRINTS Serine/threonine phosphatase family signature 619 646 IPR006186 GO:0016787
Lele14g1962 887 Gene3D - 195 376 IPR015915 GO:0005515
Lele14g1962 887 MobiDBLite consensus disorder prediction 445 472 - -
Lele14g1962 887 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 887 - -
Lele14g1962 887 SUPERFAMILY Kelch motif 67 359 IPR015915 GO:0005515
Lele14g1962 887 FunFam Serine/threonine-protein phosphatase 9 192 - -
Lele14g1962 887 Pfam Galactose oxidase, central domain 45 106 - -
Lele14g1962 887 MobiDBLite consensus disorder prediction 445 464 - -
Lele14g1962 887 ProSitePatterns Serine/threonine specific protein phosphatases signature. 653 658 IPR006186 GO:0016787
Lele14g1962 887 MobiDBLite consensus disorder prediction 378 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1962 Lele-ChrLele14 25862278 25867881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1962 585 783 Calmodulin-binding Proteins AT5G63870 32.609 2.05e-27 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1962 14 25862278 25867881 Lele15g0377 15 2162108 2167899 hybridization
Lele14g1962 14 25862278 25867881 Lele16g0397 16 2162899 2168566 hybridization