Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1956 ATGAATGAGAGGGTAGATTCTCCTGTTGGAGTTCTGGAGGACTATTTTGGAAGTCCTGAGTCAGAAACTAGCTGTTCCAATTCCAAAGAACCCACGGTGGGTTCAGGCGCTGAAGATGATAAGTCAAAACCTGCTTCCAGATGGCCTCGTTTCTTTCAACTGTTGATGACCAGATCAAAGAAACCTATAGCCCCGTTGCATCCTCTGAGTGCCCTCAGGCTCTCCAAGAGATTCAGCAGTGGCACAAGAGAGACTATACTGCCAAATCATCACATTGATGCAGATTCATCCCTCCACAGATCAACCTGCAAGATCTTTACCCACCATGACATTCAACTGGCAACCAATCATTTCAGCCAGAAGAATTTGATTGGAAAAGGAGGTTATGCTGAAGTTTACAAAGGGTGTATGCGAAATGGTCAGCTGGTAGCAATTAAACGGCTAACTCGAGGAACTCCAGATGAGATCATAGGGGACTTTTTATCAGAACTGGGCATAATGGCGCATGTGAACCATCCCAATACTTCTAAGTTGGTTGGCTATGGCGTTGAAGGAGGAATGCATCTTGTCCTTGAATTGTCTGTAAAGGGGAGCTTAACTTCGTTGCTTTATGGTTCGAAGGAGAAACTACCATGGTTTGCAAGGCACAAAATTGCGTTGGGAACGGCCAAAGGGATACTTTATCTCCACGAGGGCTGTCGTAGGAGAATTATCCACAGAGATATCAAGGCTGCAAATATCTTGCTTACGGAGGACTTTGAACCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTACCAGAGAATTGGACTCATCACACCGTTTCAAAGTTCGAAGGGACTTTTGGCTACCTTGCTCCAGAATACCTGCTTCACGGTATAGTAGACGAGAAAACAGATGTATATGCCTTCGGCGTATTGCTTTTAGAATTGGTCACAGGGCGGCGAGCACTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAGACCACTGCTGAAAAAGAATGATATAAGGGAGTTGATTGACCCTTCACTAGGCCAAGACTATGACTGTAGTCAGATTCATTTGGGGCTCTTGGTAGTTTCATTATGCATCCAACAATCCGCAATTCGTCGGCCCTCCATGAGACAGGCACGCTCTTCTGAATTTTCACACGACTTATATATATGTGCTCTTCATTCAGTTGTGCAGCTTCTGAACGGCAACCTTAGCGGCTGTAAGCACATGAAGAAGACTCGGCTCTCATTTGTTCGTAAAGTCCTAGAGGAAGGGCTCCTCCATTCTGATTAG 1293 0.4517 MNERVDSPVGVLEDYFGSPESETSCSNSKEPTVGSGAEDDKSKPASRWPRFFQLLMTRSKKPIAPLHPLSALRLSKRFSSGTRETILPNHHIDADSSLHRSTCKIFTHHDIQLATNHFSQKNLIGKGGYAEVYKGCMRNGQLVAIKRLTRGTPDEIIGDFLSELGIMAHVNHPNTSKLVGYGVEGGMHLVLELSVKGSLTSLLYGSKEKLPWFARHKIALGTAKGILYLHEGCRRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVYAFGVLLLELVTGRRALDYSQQSLVLWARPLLKKNDIRELIDPSLGQDYDCSQIHLGLLVVSLCIQQSAIRRPSMRQARSSEFSHDLYICALHSVVQLLNGNLSGCKHMKKTRLSFVRKVLEEGLLHSD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1956 430 MobiDBLite consensus disorder prediction 1 45 - -
Lele14g1956 430 SMART serkin_6 118 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1956 430 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Lele14g1956 430 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 88 192 - -
Lele14g1956 430 ProSiteProfiles Protein kinase domain profile. 118 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1956 430 SUPERFAMILY Protein kinase-like (PK-like) 98 384 IPR011009 -
Lele14g1956 430 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 414 - -
Lele14g1956 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele14g1956 430 Gene3D Phosphorylase Kinase; domain 1 89 192 - -
Lele14g1956 430 Pfam Protein kinase domain 119 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1956 430 PANTHER OS08G0249100 PROTEIN 6 412 - -
Lele14g1956 430 Gene3D Transferase(Phosphotransferase) domain 1 195 388 - -
Lele14g1956 430 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1956 Lele-ChrLele14 25828520 25830377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1956 105 384 Trihelix Transcription Factor Family AT1G68690 40.550 5.62e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele14g1956 Pkinase 1.6e-41 CL0016