Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1955 ATGTCTCTTTTCTTCTTCCTCGCAGTCCTCCTCCTCGCTTTCTCACGGCCATACCCCTCTGCTAACGACGCGCTTTGCCCCCTCGAATTCATTATCCTCCGCGACGTCACCGGCGGGCTTAGACTACCTCCTGATCCCGCCACCCACTGCCAGTACGTCCGCGACGCTCTTCATCTTGTTCAGTCCGATTACCTCCGTCGCTCTGGCTTCTTCCTCCCTCCTATCAACTCTTCTGACTCCTGCTGGCATGATTTCCACTCTTACACCCGTCAATTTGACTCCAACTTTGATATTCGCTTCTCTTGTGGATTCCAAACCAGCTGGATCTCCCAGGGATGTATGGATATTGTTACCCGGCAACAATTTGAAGCCTCTGTTCCCGAGCGAGTTCTTCAAGATGTGCGGTCGAATTGCGGTCACTCTCTTGCGCATAAGTCCCCTTGCTCTCTTTGTGTTACAGGCTTGTCCAAGTTGTCGGTTTTGTTTAGGGGACCGTCGACTGGGAACGTCTCCAATTGTAGAGACTATTCATCAATTTATGCCGCTGCTTTCCTCAATCAGTATGGACCCACCGACCCTGGTACCGCTAAGTGCTTATTCTTCATGGATCTTGAGTCTGCGAGCTCCAGTTACAGGACGGAACATATCGTTATTGCGCTTGCTTTAGTCGTTTGTGTGTTGGGTTTGTTATTCGTGATTGGTCGGTTCTGGCTTTGTCGGAGATTGAACAAGAATAATAAGATACTGAGAAAGTACAATATTAGCAGAACTGAGACGGGGTTCGATTCTGGGTTGAATTCCTCAATCAGGTTCACATTTGATGACCTAAAGAAGGCAACTAGGAACTTCAGCCTGGACAACTTGATTGGGAGAGGAGGATATGGGAATGTGTACATAGGAGTGTTGCCCGATGGCAGTGAAGTGGCATTGAAAAGATTCAAGAACTGTTCGGCTGCTGGGGATGCGAGTTTCACTCACGAAGTTGGGGTCATTGCAAGCGTGAGGCATGTCAACCTTGTAGCTCTGATAGGTTATTGCACTGCCACAACTAACTTAGAGGGTCACCAGAGGATTGTCGTCTGTGAATTGATGAAGAATGGGAGTCTTCACGATCATCTTGGGAGAAAAGCTCTTCAAATGAACGATGATGGCCAACCCTGTTCTCTCGCCGATTGGGCTTGGTCATTGGTCAGAACAGGTCGAGCTTTGGATGTAATTGAAGATGGTATGCCAGGAACTGGTAAACCGCAGGTTATGGAGAAATATGTGTTGGTTGCTATAGTTTGTTCTCACCCACAGTTATATGCGAGGCCGACAATGGAGCAGGTGATTAAGATGTTGGAGTCAGATGAATCAGTGCCAGCTATACCTGAGAGATCGATTCCTGTGGTTGCTAGGAGGATTGATGTTGAGAGAAGTATCAGCAATTGTGGGTCGGGTCAGCTTCATAGTCCAACCGGTTATCAATCATATACATCTGAGGGCGACCCTCATTCTGCTGTTAATTCTAAGAACGAAAATGAACCAAGTTGA 1533 0.4775 MSLFFFLAVLLLAFSRPYPSANDALCPLEFIILRDVTGGLRLPPDPATHCQYVRDALHLVQSDYLRRSGFFLPPINSSDSCWHDFHSYTRQFDSNFDIRFSCGFQTSWISQGCMDIVTRQQFEASVPERVLQDVRSNCGHSLAHKSPCSLCVTGLSKLSVLFRGPSTGNVSNCRDYSSIYAAAFLNQYGPTDPGTAKCLFFMDLESASSSYRTEHIVIALALVVCVLGLLFVIGRFWLCRRLNKNNKILRKYNISRTETGFDSGLNSSIRFTFDDLKKATRNFSLDNLIGRGGYGNVYIGVLPDGSEVALKRFKNCSAAGDASFTHEVGVIASVRHVNLVALIGYCTATTNLEGHQRIVVCELMKNGSLHDHLGRKALQMNDDGQPCSLADWAWSLVRTGRALDVIEDGMPGTGKPQVMEKYVLVAIVCSHPQLYARPTMEQVIKMLESDESVPAIPERSIPVVARRIDVERSISNCGSGQLHSPTGYQSYTSEGDPHSAVNSKNENEPS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1955 510 Pfam SPARK 22 162 IPR043891 -
Lele14g1955 510 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 494 - -
Lele14g1955 510 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Lele14g1955 510 Gene3D Phosphorylase Kinase; domain 1 244 362 - -
Lele14g1955 510 MobiDBLite consensus disorder prediction 475 510 - -
Lele14g1955 510 ProSiteProfiles Protein kinase domain profile. 283 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1955 510 Pfam Protein tyrosine and serine/threonine kinase 285 380 IPR001245 GO:0004672|GO:0006468
Lele14g1955 510 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 244 362 - -
Lele14g1955 510 SUPERFAMILY Protein kinase-like (PK-like) 255 378 IPR011009 -
Lele14g1955 510 Gene3D Transferase(Phosphotransferase) domain 1 364 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1955 Lele-ChrLele14 25824162 25826024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1955 375 496 Receptor kinase-like Gene Family AT2G48010 62.097 5.51e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lele14g1955 SPARK 1.5e-22 No_clan