Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1941 ATGAGCATCTCTATGGTGATGATGAGCAGAAATGCAACACAACCCCTAATCAATAGTCCTTCCGGCGGTCGAAAATTGAATCCGATCAATCTTCCACGGCAGAAAGAGAAGGTGGTGGTGGTCATGGGAGCCACCGGCACCGGAAAGTCCAGGCTCTCCATCGACCTGGCCACCCTTTTTCCTGCACAGATCATCAACTCCGACAAAATGCAAGTCTACAATGGCCTTGACATAGCCACGAACAAAATCACCAACGAAGACCGACGGGGGGTGCCCCACCATTTGTTAGGAACAGAGAACCCCGACTCAGAGTTCACGGCCACCCATTTCCGTGACGCGGCTTTACTCGCCATCGACTCAATTACGTCTTGCGGACAGCTTCCGATCATCGTTGGAGGATCCAACTCGTATGTTGAGGCACTAATCGACGACGACGACTATAAATTCCGATCGAGGTATGATTTCTGTTGTCTCTGGGTAGACGTGTCAATGCCCGTGCTCGATCAATACGTGGCCAGACGGGTTGATCAAATGCTGGAGAGTGGAATGGTAGGTGAACTGAGACCCTTTTTCAATCCATATGGAGACTACTCACGAGGGATTAGAAAAGCCATCGGAGTTCCTGAGTTCGATCAGTATTTTCGAAACGAATCGTTGATTAGGGATGAAGGAATCAAGCAGAGGTTAATGGAAGAAGCGGTGGAAGAAATTAAGAAAAACACGTACAAATTGGCGCGTAAACAATTGGGGAAGATTCAGAGACTGCGCAATGTGAAGAGATGGAAGATTCAGCGGCTAGACGCGACAACCGTGTTCCGCAAGCATGGGGAAGAAGCAGAGGAGGAATGGAAGAAGGAGGTAGCAGAGACAAGTGCTATGGTTGTCGCCAGATTTCTTTACGATTTTCCCTCTGCGAATGTTGGCGGTCGCCTTTGGCGGTCGTCATCTTCATCATCGGCCCTGGAAAACGCGATGGCAACGGCAACGTGCTGA 993 0.4985 MSISMVMMSRNATQPLINSPSGGRKLNPINLPRQKEKVVVVMGATGTGKSRLSIDLATLFPAQIINSDKMQVYNGLDIATNKITNEDRRGVPHHLLGTENPDSEFTATHFRDAALLAIDSITSCGQLPIIVGGSNSYVEALIDDDDYKFRSRYDFCCLWVDVSMPVLDQYVARRVDQMLESGMVGELRPFFNPYGDYSRGIRKAIGVPEFDQYFRNESLIRDEGIKQRLMEEAVEEIKKNTYKLARKQLGKIQRLRNVKRWKIQRLDATTVFRKHGEEAEEEWKKEVAETSAMVVARFLYDFPSANVGGRLWRSSSSSSALENAMATATC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1941 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 188 IPR027417 -
Lele14g1941 330 Pfam IPP transferase 149 249 - -
Lele14g1941 330 Pfam IPP transferase 71 144 - -
Lele14g1941 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 263 - -
Lele14g1941 330 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 263 - -
Lele14g1941 330 Gene3D - 35 299 IPR027417 -
Lele14g1941 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 35 298 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1941 Lele-ChrLele14 25722144 25723136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1941 151 299 C2H2 Transcription Factor Family AT2G27760 30.286 1.96e-21 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1503 05 9628194 9629195 Lele14g1941 14 25722144 25723136 CCT
Lele14g1941 14 25722144 25723136 Lele14g1941 14 25722144 25723136 ECH
Lele14g1941 14 25722144 25723136 Lele15g0398 15 2289133 2290155 hybridization
Lele14g1941 14 25722144 25723136 Lele16g0421 16 2273723 2274715 hybridization