Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1939 ATGGCCGGTCTCGGTAGAACCAGAATCGCTTTTCCTTCTCAATTCGCATCCGCTTTTAGCTTCCACAGGAAATTCGCCATTTGCCTCTCGTCCAGTTCAAAGGGTGTTGTTTTCTTTGGAGACGGCCCTTACGTTTTTCTTCCGAATGTCAACGCCGCTGAATCCCTCGCCTACACCCCGCTCATTGTCAACCCAGAACATCACCAGGGTGGGAGGAGTTGCTCCCTTCGAAGTGTGTTCAGTACAAAGAACGTGGGGAGAACGCGGTTGGGTGCGGCGGTGCCGACCATCGAGATTGTGCTTCAGAATAATGTGAGTTGGTTCATTTTTGGAACAAACTCGGTGGTGCCGGTGAAGGACGACGTGCTGTGTCTTGGGGTAGTGAATGGAGGTGACAGCCCAAGGACTTCAATAGTGATGGGAGAGTATCAATTGGAGAACAATCTTCTGCAGTTTGATCTGGCTTCTTCCAGATTAGGATTCAGCTCTTTGCTCTTTGGAAGGATGACTACCTGTGCAAACTTCAACTTAACCTCTGCTCCATGA 546 0.4982 MAGLGRTRIAFPSQFASAFSFHRKFAICLSSSSKGVVFFGDGPYVFLPNVNAAESLAYTPLIVNPEHHQGGRSCSLRSVFSTKNVGRTRLGAAVPTIEIVLQNNVSWFIFGTNSVVPVKDDVLCLGVVNGGDSPRTSIVMGEYQLENNLLQFDLASSRLGFSSLLFGRMTTCANFNLTSAP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1939 181 Gene3D Acid Proteases 1 41 IPR021109 -
Lele14g1939 181 Pfam Xylanase inhibitor C-terminal 77 162 IPR032799 -
Lele14g1939 181 SUPERFAMILY Acid proteases 2 172 IPR021109 -
Lele14g1939 181 ProSiteProfiles Peptidase family A1 domain profile. 1 162 IPR033121 -
Lele14g1939 181 Gene3D Acid Proteases 75 181 IPR021109 -
Lele14g1939 181 Pfam Xylanase inhibitor N-terminal 1 41 IPR032861 -
Lele14g1939 181 PANTHER ASPARTYL PROTEASE-RELATED 79 179 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1939 Lele-ChrLele14 25713330 25714109 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1357 06 8706542 8707600 Lele14g1939 14 25713330 25714109 CCT
Lele07g1564 07 9637722 9638726 Lele14g1939 14 25713330 25714109 CCT
Lele08g1354 08 8650102 8653633 Lele14g1939 14 25713330 25714109 CCT
Lele14g1939 14 25713330 25714109 Lele05g1490 05 9540334 9540921 CCT
Lele14g1939 14 25713330 25714109 Lele07g1550 07 9551029 9551916 CCT
Lele14g1939 14 25713330 25714109 Lele14g1939 14 25713330 25714109 ECH
Lele14g1939 14 25713330 25714109 Lele15g0401 15 2301949 2302728 hybridization
Lele14g1939 14 25713330 25714109 Lele16g0423 16 2282576 2283877 hybridization