Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1933 ATGGCTGCTCCTCTTGCTACCAGGCTTCAGACCATGCTGCAAGCCGCCGTGCAATCGGTTCAATGGACTTATAGTCTCTTCTGGCAACCTTGTCCCCAGGAAGGGATTCTGGTGTGGGCGGATGGTTACTACAATGGGGCAATTAAGACTCGGAAAACGGTGCAGCCAACGGAAGTTAGTGCCGAGGAAGCGTATCTCCAAAGAAGCCAGCAACTTAGAGAGCTCTACGAATCACTGTCTGCCGGAGAGACCAACCCTCCGGCTCGACGGCCTTGTGCGGCCTTGTCGCCTGAGGACTTAACAGAATCCGAATGGTTCTATTTGATGTGTGTCTCTTTCTCCTTTCCTCCTGGCGTCGGGTTGCCAGGGAAAGCATATGCGAGGAGGCAGCATTTATGGCTTGCAGGTGCAAACGAGGTGGACAGCAAAACGTTTTCAAGAGCTATTCTTGCCAAGACCGTGGTGTGCATACCTCTGTTGGACGGCGTCGTAGAGTTCGGCACAACAGATAAGGTTCAGGAAGACCTTAATTTTATCCAGCATGTGAAGAGCTTCTTCATAGATCACCAGCGGCAGCACCACCCTCCTCCGCCAAAGCCCGCCCTCTCTGAGCACTCTACCTCCAACCCCACCACCTCTTCCGACCACTCCCGCTTCCACTCCACTCCCATCCCCGTTGCCATGTACTCCGCCGTGGACCCATCACCCGCCACCCCAGACGCGCCCAACAGCCACATGAACGAAGATGACGACGAGGACGATGAAGAAGAGGCTGAGTCGGACTCCGAGGCAGAAACGGCCCGTAACAGCCGCCCAACGTCTACGCCAGAGGCGTCAGGCGTGGCAGCTCCCACTGCAGCAGAACCAAGCGAGTTAATGCAGCTGGAGATGTCGGAGGATATCCGGGTAGGATCACCGGACGATGGCTCCAACAATCTCGACTCAGATTTCCATATGCTGGCGGTGAGCGGCCCAACGGATCACGAGCGACGAGCGGACTCGTCCAGGGCCGAGTCTACCCGGAGGTGGGTCGAACCAGTGCTTCAACTACCAGCTTCAGAAGGCGCTCAGCTTGAAGACCTCACACAAGAGGACACCCACTACTCTCAAACAGTTTCCACCATCCTCCACAATCAGTCCATCCGGTGGGCCGAATCACCCTCCGTCGACTACATAACTTACTCCTCTCAATCCGCTTTTGCCAAGTGGAACACCAGTGCCGACCTCCACCACCACCTCCTCCACACCTCCGCCGACGGCACCTCCCAGTGGCTCCTCAAGTACATTTTGTTCACCGTTCCTTTCCTTCATGCCAAGTGCCAAGACGACAACTCGCCCACGCCCCGAGAGGGAACTGATCCCGTCCCGCGCCTCCGTGGAAAGGGAACGCCGCAGGATGAGCTGAGCGCCAACCACGTCCTGGCCGAGAGACGCCGACGCGAGAAGCTCAACGAGAGGTTCATCATACTGAGATCGCTCGTGCCCTTCGTCACCAAAATGGACAAGGCATCCATATTAGGGGACACCATCGAGTACGTGAAACAGTTGCGTAAGAAGATCCAAGATCTGGAGGCACGTAACCGCCAGATGGAGGCAGAGCAACAGTCAATGGAGCAACAGAGGAACCTGACGAGAGTGGGGTCGGACAAGAGGAAGATGATAATCATGGAGGGGATTGGAGGGATGAGGAAGCCGAAGTCAGTGGAGTCGTCCCCTCCTCCATCGCCGTCGGGAGTGGTGATATCGGTGCAAGTGTCGATCATAGAGAGCGACGCACTGTTGGAATTGGAATGCGAGAACAGGGAGGGGCTGTTGCTGGATGTGATGCAAATGCTGAGAGAGATGAGGATAGAGGTAACGACGGTGCAGTCGTCGCTGAACAACGGGGTGTTCGTGGCGGAGCTGAGGGCGAAGGTGAAGGAAAATCCGAACGGAAAGAAGACGAGCATAGTTGAAGTAAAGAGGGCGCTCAACCAAATCATACCCCACAGTGATTGA 1998 0.5596 MAAPLATRLQTMLQAAVQSVQWTYSLFWQPCPQEGILVWADGYYNGAIKTRKTVQPTEVSAEEAYLQRSQQLRELYESLSAGETNPPARRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHLWLAGANEVDSKTFSRAILAKTVVCIPLLDGVVEFGTTDKVQEDLNFIQHVKSFFIDHQRQHHPPPPKPALSEHSTSNPTTSSDHSRFHSTPIPVAMYSAVDPSPATPDAPNSHMNEDDDEDDEEEAESDSEAETARNSRPTSTPEASGVAAPTAAEPSELMQLEMSEDIRVGSPDDGSNNLDSDFHMLAVSGPTDHERRADSSRAESTRRWVEPVLQLPASEGAQLEDLTQEDTHYSQTVSTILHNQSIRWAESPSVDYITYSSQSAFAKWNTSADLHHHLLHTSADGTSQWLLKYILFTVPFLHAKCQDDNSPTPREGTDPVPRLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARNRQMEAEQQSMEQQRNLTRVGSDKRKMIIMEGIGGMRKPKSVESSPPPSPSGVVISVQVSIIESDALLELECENREGLLLDVMQMLREMRIEVTTVQSSLNNGVFVAELRAKVKENPNGKKTSIVEVKRALNQIIPHSD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1933 665 MobiDBLite consensus disorder prediction 323 340 - -
Lele14g1933 665 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 467 516 IPR011598 GO:0046983
Lele14g1933 665 MobiDBLite consensus disorder prediction 204 220 - -
Lele14g1933 665 Pfam Helix-loop-helix DNA-binding domain 470 517 IPR011598 GO:0046983
Lele14g1933 665 SMART finulus 473 522 IPR011598 GO:0046983
Lele14g1933 665 Gene3D - 591 661 - -
Lele14g1933 665 Gene3D - 468 543 IPR036638 GO:0046983
Lele14g1933 665 MobiDBLite consensus disorder prediction 322 342 - -
Lele14g1933 665 MobiDBLite consensus disorder prediction 246 262 - -
Lele14g1933 665 PANTHER TRANSCRIPTION FACTOR TT8 7 663 - -
Lele14g1933 665 MobiDBLite consensus disorder prediction 441 467 - -
Lele14g1933 665 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 186 IPR025610 -
Lele14g1933 665 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 541 IPR036638 GO:0046983
Lele14g1933 665 Coils Coil 506 543 - -
Lele14g1933 665 MobiDBLite consensus disorder prediction 189 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1933 Lele-ChrLele14 25685016 25690141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1933 302 663 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 39.237 3.65e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele14g1933 bHLH-MYC_N 6.8e-47 CL0161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1933 14 25685016 25690141 Lele15g0405 15 2316326 2320975 hybridization
Lele14g1933 14 25685016 25690141 Lele16g0429 16 2304229 2306286 hybridization