Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1902 ATGTTTCACGATCACGGACTCTGGCACCTACTCACTTTAGGGTTTATGATTTCCTTCATAATTCCCGTCGCTTACGGCGAATCGTCTACCTGTTTGACTGTCTACAAGAGAGGTGGTGCTCCGGCTGTTTTCCAATCACCGAAATGCCCCCGCTGGAATCTCTTCGATGCTGGCTCCCGTTCCCAAACCCCGGCGCGTTGTCAGTACGCGATGCTTCAGGGCAGAAGAAAATCTCAGGAGGACCGCACCCTCTGCGTCCTTGATGTTCGCATTCCCTTCCCTGGTAAAATGGGAATTAAGGAGGTTGTGGTTGGAATTGTAGCAGTTTTTGATGGTCATAATGGTGCAGAAGCTAGTGAGATGGCATCCAAACTTTTGGTGGAGTATTTTGTGTTGCATACCTATTTTCTTTTGGATGCAACATATTCATTTCTGTTGAAGACATCGTCAGGAAGACTGCCTCATAAGAGAGATTGTGATGAAGAAAGACATGTACACAAGTGGGAAGAGATTCTTGGTTGGGATGAATTGCATTTTGGAAGGTTTGAGAATAAATTTTCAGCAAATTTTGATGAATCTTTTCACTTGGAAATTTTGAAGGAAGCGTTGTTGAGAGCAATCCATGATATTGATGCAAAATTTTCTGAGGAAGCATCTAGGAGTAATCTTGATTCCGGTTCTACAGCAACCACTATATTAATTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCTTCTTGTGTTCTGAGAAGTTTCAGACTCCCAAAGAGGCTAAAGCATCGTTGTTAAAGTTATACAGGCAGAAGGAGGGTGATAGTTTTGTTTCCCGTGTCTGGGATCGTGAAAAGTACAAATTAGCTTCCTCGTTCGGATTCACTCACTTTGCAGCTAAGGAATTAACCAGTGACCATCATCCAGACAGAGAAGATGAAAGAACTCGGGTGGAAACAGCTGGTGGTCAAGTTATTGATTGGGGAGGTGTGCCTCGCATAAATGGTCAGCTAGCTATTACACGGGCTATTGGTGATGTGTCCTTCAAAAGTTATGGTGTTATATCCGTACCAGAGGTGACAGATTGGCTGCCTCTGACTGCCAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTTTGAGAAGATGGGCTCCCAAGATGTATGTGATATGTTGTGGGAAGTACATAGTTACGGTAACCCAAGATCTGAGGTTTCCCCTTCATGCTCCTATTCACTGGCAGATTGTATTGTCAACGCTGCCTTGAAAAAGGGAAGTATGGATAATGTGGCAGCAGTTGTGGTTCCTCTGGAATCTGCTATTGTTTTTGATGACTCATTTGGGAGAAATTGTATTGAGAAGAGGGATGTGGATACCTCGCTGCTTGGACTGCAGGAATTTGCTTCCAGAAGCTCTGCTAATGGCATTGCATCGGATCTAATGCAACTGGAGCATCTGCGTCCAGTGGATGCTGGGTTTGAGCGTATATTGGCTGAAGTGAAATATGGTGATGTTGGATGTTTTTATTTATCTGAAAATCTTGATGAAGCTATGGACTATAAGCAGCCTGCTACAAAGACCAACTGGTTAAACTATTTAGATAAACTACCAGAGCCTTTGCCAGATGCTCTTCATCAATATTCTGGTGGTCCTGTAAATTTGTACAACAACCAAAATTTTTGCTTTCACCTTGGCATGACTGTCAATGGAGCTAACGAGCAATGCATAAACCCCGAATCCTTTGCTAGTTTTATTGGTCTGCTTGAATCAATTCCTTTACATGATACTAGTTCAAATAATGGGTCTTTTGATTCTTCAATGCCTGATATGAGGTATGTTTTAAAACAGAGGTTTGGCCGTGGATCATATGGTGAAGTGTGGTTGGCCTTTCATTGGAACTGTCAAGTTGGCAATGATCCAAAGTTGAGCAAGGATAACAATAATTCCTCCCTTAGCTTTATCAATTTTGATTCATACAATGGAAATAGCAGCTCAAGTACTCATGATTGCCCGAACGGTCCTTCTAACCACAACATGTACATTCTGAAACGGATAATGGTAGAGAGAGGGGCTGCTGTTTACTTAAGTGGTCTGAGGGAGAAGTATTTTGGAGAAGTTTTTTTAAATGCTTCCATGTGCTTTGAAGATCTACTTTCAGCTGGAAACTCAAACTGTGTCTCAAGAAAATCACAATTCAGGTCTTATGACCAATTAAAAACCAATGATTCCATGCTACATTATATAAGAAACTCTTGGGGTTCTGAGAATTTATTTACAGACAAATTCCAGTTGCAAAAGGCCATCCATGAAGAGGGTCTGAACCATATTGCAAGATACGTGGAATCTTTCGAATCTCTATCTAACGAATTCTGGCTTGTATTCCGTTATGAAGGCATATCTTTGTCCAAACTTATGTATACTGTGGAGGAAGCTTATGATACTGCTGACAGTAAAAGATCTGAACATGTGAAACATGTTCAGATATTACGTCCATCAAAGTGGTGGCATTGGTTGAAGACAACGGAAGAAGGGCAACAGGAAATGCGCAACATTTTATGGCAGCTGTTAATGGCACTGAAGTCCTGCCATGATCGGAATATCACTCACAGAGATATCAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAGACCGGAAGATGCTTAAAAGAGGTTCCAACAATTAATAGGACGATCTCGACCAAAATCCGTATCATTGACTTTGGCAGTGGAATTGATGAATTTACATTGAAGCACTTATATGGATCTGCTGGGCCATCTCGAGCTGAACAAACTTACGAGTATATGCCTCCTGAAGCTTTGCTAAATGCTACTTGGTATCAAGGACCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTGGAGTTGATATTGGGAACGCCAAATGTTTTCCAGATAAGCTCTTTAACACGGACTCTTTTGGACCGGCATCTTGAGGGCTGGAATGATGGCATAAAGGAGTTGGCGTACAAACTTAGATCGTTCATGGAATTGTGCATATTAGTCCCTGGGATTTCTGGCAGTTCCTTCAAACAGTACCACACAGGGAACCAAGTTGGAGTCCCTCCTGCATCATGGAAATGCTCCGAGGATTTCTTTTCGCATCAAATTAAGAGTCGGGATCCTCTTAAATTAGGGTTTTCAAACATCTGGGCTCTACGGTTAGTGCGTCATCTATTGCTCTGGGACCCAGAAGATCGACCGAGTGTTGACGAGGCATTGCAGCACCCCTATTTTCAACCGTCCCCAAGTGGCTGA 3306 0.4232 MFHDHGLWHLLTLGFMISFIIPVAYGESSTCLTVYKRGGAPAVFQSPKCPRWNLFDAGSRSQTPARCQYAMLQGRRKSQEDRTLCVLDVRIPFPGKMGIKEVVVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDATYSFLLKTSSGRLPHKRDCDEERHVHKWEEILGWDELHFGRFENKFSANFDESFHLEILKEALLRAIHDIDAKFSEEASRSNLDSGSTATTILIADDKILVANIGDSKAFLCSEKFQTPKEAKASLLKLYRQKEGDSFVSRVWDREKYKLASSFGFTHFAAKELTSDHHPDREDERTRVETAGGQVIDWGGVPRINGQLAITRAIGDVSFKSYGVISVPEVTDWLPLTANDSYLVAASDGVFEKMGSQDVCDMLWEVHSYGNPRSEVSPSCSYSLADCIVNAALKKGSMDNVAAVVVPLESAIVFDDSFGRNCIEKRDVDTSLLGLQEFASRSSANGIASDLMQLEHLRPVDAGFERILAEVKYGDVGCFYLSENLDEAMDYKQPATKTNWLNYLDKLPEPLPDALHQYSGGPVNLYNNQNFCFHLGMTVNGANEQCINPESFASFIGLLESIPLHDTSSNNGSFDSSMPDMRYVLKQRFGRGSYGEVWLAFHWNCQVGNDPKLSKDNNNSSLSFINFDSYNGNSSSSTHDCPNGPSNHNMYILKRIMVERGAAVYLSGLREKYFGEVFLNASMCFEDLLSAGNSNCVSRKSQFRSYDQLKTNDSMLHYIRNSWGSENLFTDKFQLQKAIHEEGLNHIARYVESFESLSNEFWLVFRYEGISLSKLMYTVEEAYDTADSKRSEHVKHVQILRPSKWWHWLKTTEEGQQEMRNILWQLLMALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEVPTINRTISTKIRIIDFGSGIDEFTLKHLYGSAGPSRAEQTYEYMPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELILGTPNVFQISSLTRTLLDRHLEGWNDGIKELAYKLRSFMELCILVPGISGSSFKQYHTGNQVGVPPASWKCSEDFFSHQIKSRDPLKLGFSNIWALRLVRHLLLWDPEDRPSVDEALQHPYFQPSPSG 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1902 1101 ProSiteProfiles PPM-type phosphatase domain profile. 66 439 IPR001932 -
Lele14g1902 1101 PANTHER PROTEIN PHOSPHATASE 62 438 - -
Lele14g1902 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 869 881 IPR008271 GO:0004672|GO:0006468
Lele14g1902 1101 SUPERFAMILY PP2C-like 65 440 IPR036457 -
Lele14g1902 1101 SMART serkin_6 614 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1902 1101 SMART PP2C_4 58 437 IPR001932 -
Lele14g1902 1101 Pfam Protein kinase domain 844 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1902 1101 SUPERFAMILY Protein kinase-like (PK-like) 613 1097 IPR011009 -
Lele14g1902 1101 FunFam uncharacterized protein LOC106771884 isoform X8 835 1096 - -
Lele14g1902 1101 Gene3D Transferase(Phosphotransferase) domain 1 834 1096 - -
Lele14g1902 1101 Pfam Protein phosphatase 2C 197 432 IPR001932 -
Lele14g1902 1101 ProSiteProfiles Protein kinase domain profile. 614 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1902 1101 Gene3D - 61 443 IPR036457 -
Lele14g1902 1101 CDD PP2Cc 73 439 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1902 Lele-ChrLele14 25539108 25549297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1902 689 1100 PP2C-type Phosphatase Gene Family AT3G63340 61.205 1.23e-170 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Lele14g1902 Pkinase 1e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1902 14 25539108 25549297 Lele15g0431 15 2478847 2482134 hybridization
Lele14g1902 14 25539108 25549297 Lele16g0459 16 2451272 2461456 hybridization