Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1901 ATGGATTACCCGTACTTAATGAAAGAAGAGTACTTGGAAGCGACTTCATCTCATTCGGTAGGTGAAGCATCGACAATTGCCCTTCCGCAGCCAATGGAGGGGCTTCACGAGCTGGGGCCACCACCATTTCTGACCAAGACATTCGACGTTGTGGACGACCCAACTACCAATCATATGGTTTCTTGGAGCAGAGGGGGGGCTAGTTTTGTGGTTTCGGATCCACATACCTTCTCTACGAGTCTGCTTCCCAGATTCTTTAAGCACAACAATTTCTCAAGCTTTGTCAGGCAATTGAACACTTACGGATTTAGGAAAATTGATCCAGACAGATGGGAGTTTGCAAATGAAGGATTTCTGAGAGGCCACAGGCATCTCCTGAGGAACATTAGGAGAAGGAAGGCACCTGCTAATTTGAGTCTTTCCCAACAAGCACAACAGCAAGGCCATTGTGTTGAAGTAGGAAGGTTTGGACTAGACGAGGAAATTGACCGTTTGAGGCGAGACAAGCAAGTGTTAATGATGGAGCTGGTGAGGCTTAGGCAGCAGCAACTAAACACTAGATCATACCTTCAGGTAATGGAACAAAGGTTACAAGGCACGGAAAGAAAGCAGCAACAGATGATGGCTTTCTTGGCCAGAGCTATGAAAAATCCTTCCTTTCTCCAGCAGCTACTCCAACAGAAGGACAAGAGAAAGGAGCTCGAAGAAGCCATAACTAAGAAGAGAAGGAGGCCAATTGAGCAAGGACCAAGTTGTGTTGGGGAATCCAGCAGTGAAAGAGAAGCAATGAACCATATAAAAGCTGAGCCTTTAGAATATAGTGACTATGGGTTTGAAGTGTCAGAACTGGAAGTGTTAGCTATGGAAATGCAAGGTTATGGTATGGGAATAAGAGAACAGGAGGCACCAGAAGAACCACGGGAGAGGCTGGGAAAAGAACTCGATGAGGGTTTCTGGGAAGAACTGTTCAGTGAAAATTTTGAGGGTGAAATAGGCATTCCAAGCACTGAAGGTGAGGATGAAGATGTTAATGTCTTGGCCAATCGCTTAGGCTACTTGGGTTCGAGTCCTAAGTTGCAGCTGGTGATTGCTCAAGAAATCTGTGGTAGTGATAGCGGTCATAATATTGATCTCAAGAGCCGGTTGATCATGGTTGACTTGTCGGTTGAATGTCTAGTCAAAACTGCTTTTCTGATGCTCAATGTCATTCTCTCTGAACTCGCAAAGCAGCAGATTCCAGGTGAAAGATGTGGAAATATATGTACTGATGAGGAAGTTGCCACGATGGATGCTATGTGTGGCACGCTGAGAAAGTTGGGAGTTTGGATGATTGAGGAACAGATAAAGTCAAAGTCAATAATGCGATGCCATCCCTCGATGGCTGATCGTTTGGCAAGCTTGCTAGCAGCAACAGCTCTTGAAGCGTTGTTTGAATGTTCAGCATTTGTAATTGTTTTTGTTCCATGGGCTTCTCCTTCTAGGATTATACCTAGAAACCAGATACTTAGATTATTTATTTCAATTCTTGCCCCTTGTTATGTTGCCATGGCCAATTCTGCTTCTTTGTCTGAAGAAGCCACTGTCTCTTTTGGTACTAGAGTCCAGAACTTCACTGCATCAAGTTATATCGTTTCGAACACCATCCCTCCTCAGCAGCCTCAAAAGATAAAGAAAAAAAGAAGCCTCCCAGGAAATCCAGACCCAGATGCTGAGGTGATTGCGTTATCCCCAAAAACCCTTCTGGCTACGAATAGATATGTGTGTGAAATCTGCAAAAAGGGTTTTCAGAGAGATCAGAACCTTCAGCTACACAGGAGAGGACATAACCTTCCATGGAAGCTGAAACAAAGGAACAGCAAGGAGGTGAAAAAGAGAGTTTATGTTTGCCCCGAGCCTTCGTGCGTTCACAACAATCCCTCGAGAGCTCTGGGTGATCTCACTGGTATTAAGAAACACTACTGCAGAAAACATGGAGAGAAGAAGTGGAAATGTCAAAAGTGCTCCAAAATCTACGCTGTTCAGTCAGATTGGAAAGCTCACTCCAAAACCTGTGGAACTAGAGAATACAGATGTGATTGCGGAACCCTTTTCTCCAGGAAGGACAGCTTCATAACTCATAGGGCATTTTGTGATGCACTGGCTGATGAAAGTGCGAGACTCGCAGCTAATCAACTAGCTTCCACAAACCCAATGTTATTTCAACCTCTCTTCCCTCTCCAGAATCAAATCATGATGAATCCCTGGGACCCATCTCCAGGAAACCCTAACCCTAGTAGCAACATTGATGGCGTCCAAATCAAGACTGAAGCTCAGTGTTTTCAGGTCCCATCCCTCTCTTCTCCTCCATTTCTTCAAGTGCAGCAGCAGAATCAGAAGAACATGATAAACCCATTCTTAGGAACTCTCCATGTGGCCTCAATCGCCGCCACGTCGGCCCACCTGTCAGCCACTGCGCTCCTCAAAAAGGCGGGAACAGTGGGTTCCACTGCTATCACAGGTCCAGGTGCTGCCGCTGCAGCCGATGGTGGACCACACCCAACAATGGCTCACGTGACTCAGCCAAGCATGGGCGAGTTCGGACTCGCGACTCATCAGCAGATCGACTCGGCGGGTCAGGACTACATTGGAGCGCTCGTGACCCGGAATCAAAGTGAACATCTGACCAGGGACTTCCTCGGCCTGACCGCCGCTGTCGACGGCGGAAGAAATGGTGGCCCCGTTGACGTTGGCCTGAACGCGAAGGATATGCTGATGTTCACGGGTGGCGTAGAGTATGATCAGTATCTTCCATACGATCACCATCAGCACTCGCTCTTCACGACCCAACAAGATTTTGGATTCTTCGGGACAGTCACTACCCCAGAGACGGTGTGGGGGACCTCTTGA 2886 0.4702 MDYPYLMKEEYLEATSSHSVGEASTIALPQPMEGLHELGPPPFLTKTFDVVDDPTTNHMVSWSRGGASFVVSDPHTFSTSLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGHRHLLRNIRRRKAPANLSLSQQAQQQGHCVEVGRFGLDEEIDRLRRDKQVLMMELVRLRQQQLNTRSYLQVMEQRLQGTERKQQQMMAFLARAMKNPSFLQQLLQQKDKRKELEEAITKKRRRPIEQGPSCVGESSSEREAMNHIKAEPLEYSDYGFEVSELEVLAMEMQGYGMGIREQEAPEEPRERLGKELDEGFWEELFSENFEGEIGIPSTEGEDEDVNVLANRLGYLGSSPKLQLVIAQEICGSDSGHNIDLKSRLIMVDLSVECLVKTAFLMLNVILSELAKQQIPGERCGNICTDEEVATMDAMCGTLRKLGVWMIEEQIKSKSIMRCHPSMADRLASLLAATALEALFECSAFVIVFVPWASPSRIIPRNQILRLFISILAPCYVAMANSASLSEEATVSFGTRVQNFTASSYIVSNTIPPQQPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRYVCEICKKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKRVYVCPEPSCVHNNPSRALGDLTGIKKHYCRKHGEKKWKCQKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALADESARLAANQLASTNPMLFQPLFPLQNQIMMNPWDPSPGNPNPSSNIDGVQIKTEAQCFQVPSLSSPPFLQVQQQNQKNMINPFLGTLHVASIAATSAHLSATALLKKAGTVGSTAITGPGAAAAADGGPHPTMAHVTQPSMGEFGLATHQQIDSAGQDYIGALVTRNQSEHLTRDFLGLTAAVDGGRNGGPVDVGLNAKDMLMFTGGVEYDQYLPYDHHQHSLFTTQQDFGFFGTVTTPETVWGTS 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1901 961 FunFam protein indeterminate-domain 5, chloroplastic-like 640 719 - -
Lele14g1901 961 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g1901 961 SUPERFAMILY beta-beta-alpha zinc fingers 585 682 IPR036236 -
Lele14g1901 961 Coils Coil 162 182 - -
Lele14g1901 961 Gene3D Classic Zinc Finger 640 718 - -
Lele14g1901 961 FunFam Heat shock transcription factor 1 36 133 - -
Lele14g1901 961 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g1901 961 ProSitePatterns Zinc finger C2H2 type domain signature. 588 608 IPR013087 -
Lele14g1901 961 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Lele14g1901 961 Gene3D Classic Zinc Finger 565 633 - -
Lele14g1901 961 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g1901 961 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g1901 961 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g1901 961 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 548 902 IPR031140 -
Lele14g1901 961 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g1901 961 ProSiteProfiles Zinc finger C2H2 type domain profile. 586 608 IPR013087 -
Lele14g1901 961 SMART c2h2final6 627 657 IPR013087 -
Lele14g1901 961 SMART c2h2final6 586 608 IPR013087 -
Lele14g1901 961 SMART c2h2final6 662 682 IPR013087 -
Lele14g1901 961 Gene3D - 36 133 IPR036388 -
Lele14g1901 961 Coils Coil 224 244 - -
Lele14g1901 961 FunFam protein indeterminate-domain 12-like 565 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1901 Lele-ChrLele14 25522779 25535007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1901 19 356 HSF AT3G22830 54.960 2.07e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele14g1901 HSF_DNA-bind 3.1e-30 CL0123