Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1895 ATGACGACGGGGATCGGACACGACCAGAACCTCGAGAAGCAGTTTGGAAGGCAAATGGGTTGCATGGCCGGCTTCCTTCACATCTTCGATCGCCACCAGATTCTCTCCGGCAAGCGCATCTACTCTACCAAACGACTTCCCCCCTCCGATGTGTCGAATTCGTCGCCGGAACCACTTAATTTTGTTGGCTCCCCGGCCAAATGCAGAGAAGTGGAGGCGCAGCCGCCAAGATCAACACCGTCCCCCGACCGTGTGAAACAGAGTCCCTCCAGGGAGCCCCAGTCTCCGGCGCCCGAATCTCAGGCTCAGGCCAGCACGCCTCTTCATCTTCCCGTTTTTGAATTCAAGGAAGGCACGAGGTCTTCGTGGAAGTTCGCCAGAGAAGTTCCTAGGCTATCTTTGGACAGCAGAGCAGTGGTGGACGCCAAAGGCGCACTACATCCCAGGGAGATCGGAACGAGTTCTGCAATGTTATCGGCCAATCGATGTGAGAATCTAGTTGAAGAAGCAGAAAGTGATAGTGAGAAACAGCGTCGATCGACGAGCGTGATAGCCAGGCTCATGGGACTGGAATCTTTACCGGATTCGGATCCTGAGCCGGTGAAGAATGCTGAGCTTCGAAGATCCGCTTCTGAGTCCAGAGTTAGCAGAGATCTGTTACAGCACCGTTACTTTGACAGTAACAATATTCAGCGAAAGCAGTTACAGCAGCAGTCAAACTCTCAGGTTAACATTTCCAGCAATCTAGCTAGGGACCATGCGGCAGCCATCGACAATCGTCGTGTATACAATGTCAGGCCGGCAGATCCAAAAGAATTTGCTGTACGAAATGGCAAGACAGAGCCTGCAAAAGCTTCTCCGAGGGGACTAGGACAAAAGAAGAGTTTCTTTGATTCCGCTGACTTTTTCCCCGAGCCAAAGCATACTGTATCAATCTACGGGGAGATTGAGAAGAGGTTGAAGATGAGAGGAATCGATGAGCCATCTAAGGATCTCGAGACTCTCAAGCACATCCTCGAGGCTCTGCAGCTCAAAGGTCTGCTGCATTCCAAGAAATCATCATCTCAAGCTGACCAGAGGAACTTCGTGTTTAACGGGAGCATCTCAGTGAACGAATCCCCGATTGTTGTGATGAAGCCAGCAAGATCTCCGACTTCATGGAATCGACCTGGAAGGGTCGGTAGTGACTCTCCACCCTCGAGCTTTCGATCAAGTCCTCGAGCTCGGGGTAACCTGAACCTTGCCAACGGCACTCTTCCCACGTTGAGCCCCAGGCGTGAAGGGCCTGAGTTGAATCGGAATGCACGAAATCAACCGAGAGTCAGGAACTTGAGCTTGCCCACTCGGAGCGAGAGCAGTGTGAAGAGCCCAAGCCGGAGTAGGCTAATGAACGCGGAGGAACAGAGGAAAGGGAATGACTCTGTTGGTCAGAGAAGAATCTCTCCAGTTCATTCCCCAAAATTAGGTTCCAGAAGGAATGTACCCCATCAGCAAGTGAGGAATAGGTCGCCCAGAATGAGAAAACCGGTGGCTGAGACTTACGAGAAGGAGAAGGAGTGGAGTGTAGCAGAGGATGAATCATCCACCATGTCGGAGAGCAGCATTAGCACGTCTTCGCAGACAGATACAGAGAGATGCAAGTTGGAGGAGTACAAGGAAGGGAGAAATCTATTGGAGAGGTGTGACAAGCTGCTGCACAGCATAGCCGAAATAACTGCGAGCGAGTTGCAGCCGAGTCCAGTCTCAGTGCTGGACTCGTCTTTTGACAAGGACGAGTGTTCATCACCATCTCCAGTCATGAAGCGGTGCATTGATTACAGAGAACAACCGGCGGAATCAGAGGACGACATGTGGAGTGCAGCCATGGGTTCCATGGGAGGAGCCATATCGGAGGAGACATCAGAGGATTACGACTTCGTTTATGTCTCGGAAATCCTGCGAGCTTCCAATTACTTGCCCAAAGACAGCGACATTTTCCTATTACTGGAGAAGCAGCAATATCTCAAGGGGAAGGACACCTCCAAAGCTTCGACGCTGCAAAGAAGACTCATCTTCGACACCATACACGAAATCCTGAAGCGGAACAAACAACTACCGCCGTGGAAGGCCATTTCGTGGATTGGACAGACGCCGTTGTTGCAGAGAATATGGTCGGAGTTCCGGCGGATCCGAAGAGAGAAGGAGGAATCAGAGGACTTGTTCGAGGTAATATGCGGCGTGTTGAGGAAGGACCTGGCGGAGGACGGCATGAATGGATGGGGAGAATGCCCGGTGGAGATGGGCGAGGTTGTTCTGGACATAGAACGTCTCGTGTTCAAGGACCTCATCGGCGAAACCATACGAGATCTCGCCCAGTCATGTAACAGGGTCTCCGCTCTCCGTAGGAAATTGGTGTTCTGA 2400 0.5188 MTTGIGHDQNLEKQFGRQMGCMAGFLHIFDRHQILSGKRIYSTKRLPPSDVSNSSPEPLNFVGSPAKCREVEAQPPRSTPSPDRVKQSPSREPQSPAPESQAQASTPLHLPVFEFKEGTRSSWKFAREVPRLSLDSRAVVDAKGALHPREIGTSSAMLSANRCENLVEEAESDSEKQRRSTSVIARLMGLESLPDSDPEPVKNAELRRSASESRVSRDLLQHRYFDSNNIQRKQLQQQSNSQVNISSNLARDHAAAIDNRRVYNVRPADPKEFAVRNGKTEPAKASPRGLGQKKSFFDSADFFPEPKHTVSIYGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKSSSQADQRNFVFNGSISVNESPIVVMKPARSPTSWNRPGRVGSDSPPSSFRSSPRARGNLNLANGTLPTLSPRREGPELNRNARNQPRVRNLSLPTRSESSVKSPSRSRLMNAEEQRKGNDSVGQRRISPVHSPKLGSRRNVPHQQVRNRSPRMRKPVAETYEKEKEWSVAEDESSTMSESSISTSSQTDTERCKLEEYKEGRNLLERCDKLLHSIAEITASELQPSPVSVLDSSFDKDECSSPSPVMKRCIDYREQPAESEDDMWSAAMGSMGGAISEETSEDYDFVYVSEILRASNYLPKDSDIFLLLEKQQYLKGKDTSKASTLQRRLIFDTIHEILKRNKQLPPWKAISWIGQTPLLQRIWSEFRRIRREKEESEDLFEVICGVLRKDLAEDGMNGWGECPVEMGEVVLDIERLVFKDLIGETIRDLAQSCNRVSALRRKLVF 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1895 799 MobiDBLite consensus disorder prediction 526 542 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 436 461 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 45 109 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 505 525 - -
Lele14g1895 799 PANTHER LONGIFOLIA PROTEIN 82 799 IPR033334 GO:0051513
Lele14g1895 799 MobiDBLite consensus disorder prediction 388 420 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 198 214 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 46 60 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 189 214 - -
Lele14g1895 799 MobiDBLite consensus disorder prediction 381 545 - -
Lele14g1895 799 Coils Coil 160 180 - -
Lele14g1895 799 Pfam DUF761-associated sequence motif 173 196 IPR032795 -
Lele14g1895 799 MobiDBLite consensus disorder prediction 80 107 - -
Lele14g1895 799 Pfam Domain of unknown function (DUF4378) 638 778 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1895 Lele-ChrLele14 25464774 25467946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1895 524 799 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 50.709 2.00e-71 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1895 14 25464774 25467946 Lele15g0441 15 2558815 2562739 hybridization
Lele14g1895 14 25464774 25467946 Lele16g0465 16 2535345 2538487 hybridization