Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1890 ATGAAGGCTGAGTACAAGGAGGAAGAGTTCGAGGATATGGACGAGGAGTCGATCGTAGGCCTTATGGCAAAGCAAAGCGACATCTTTGCTGCTCATGCTCAAGCCTCAGGGTTTAACCTAGATATGGACACCCACTCGTCTCACGCGGCCGGAACTATTCGCTCCCGTAGCTCCCAGTCCCCTTCTCCTTCTCACTCCGCTTCTGCCTCTGCTACCTCTACTATCCACAAGCGCAAGATGGCGTCTGACGATCACGCTCCTCCTTTCCCCCCCTCTTCCTTCTCCGCCGACACCCGCGACGGCGCTTTAACCTCCAATGATGACCTCGAGAGCATTTCTGCTCGCGGCGCTGATTCCGACTCGGACGATGAGTCCGAGGATGCCGTTGTTGACGAGGAGGAGGAGGATTACGACAATGACTCCTCCATGCGCACCTTCACTGCCGCTAGGCTTGAAAACCCCCCCTCAGCTCCGCGGAATACCAAGCTCCAAAAGGATAATACGACGGTCAAGATAGAGAATTCGGATGGTGCCAAAGACGCTGCCACCGCCGGGACTGCTACCGTGGGAACCATTCCCACCTCGACCTCAGTTCCGGGCATTATGGTTAAGGAGGACGCAACAAAGATTTTTACTGATAATTTGCAGACTAGTGGGGCATACTGTGCGAGGGAAGAGAGTCTAAAGAGAGAGGAAGAAGCAGGGAAGCTGAAATTTGTATGCCTTTCAAATGATGGTGTTGATGAGCACATGGTTTGGTTGATAGGGTTGAAGAATATTTTTGCTAGACAACTTCCCAATATGCCCAAGGAATACATTGTCCGACTTGTTATGGATAGGAGCCACAAGTCTGTGATGGTTATAAGACGTAATCAAGTTGTTGGAGGAATTACATATCGCCCATATGTAACCCAAAAGTTCGGTGAGATAGCCTTTTGTGCGATAACAGCTGATGAGCAAGTAAAAGGTTACGGCACCAGATTGATGAATCACTTGAAACAGTATGCTCGTGATGGGGATGGATTGACACACTTTCTCACATATGCTGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTCACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCATACACTGATTTATCAACTATGATTCGTCGTCAGAGGCAGGCTATTGATGAAAAGATAAGAGAGCTGTCAAACTGCCACATTGTTTATCCTGTATTTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAATCGATCAAAGTTGAGGACATCCCTGGTCTGAGAGAGGCTGGATGGACTCCTGATCAATGGGGTCATTCTCGATTTAGAAGTTTAACTGTTTCTACAGACAGCGCTACAAATCAAAAACATTTGACTGTATTTATGCGATCACTTCTAAAGTCAATGCACGATCATGCTGATGCCTGGCCATTCAGGGAACCAGTTGATGCCCGGGATGTTCCTGATTATTATGAGATCATCAAAGATCCAATGGATCTGAAGACAATGTCGAAGAGGGTGGAGTCTGAGCAATATTATGTTACATTTGAGATGTTCGTTGCAGATGTCAGAAGAATGTTCGCCAATGCACGAACCTATAACTCTCCAGATACTATTTATTACAAATGCGCTACCAGGCTGGAAGCCCATTTTCAGAGCAAGGTTCAATCAGGTCTACAGTCTGGCACCAAAATTCAGTAG 1767 0.4629 MKAEYKEEEFEDMDEESIVGLMAKQSDIFAAHAQASGFNLDMDTHSSHAAGTIRSRSSQSPSPSHSASASATSTIHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDESEDAVVDEEEEDYDNDSSMRTFTAARLENPPSAPRNTKLQKDNTTVKIENSDGAKDAATAGTATVGTIPTSTSVPGIMVKEDATKIFTDNLQTSGAYCAREESLKREEEAGKLKFVCLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNQVVGGITYRPYVTQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDGDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPVFDFQKKEAGIPKKSIKVEDIPGLREAGWTPDQWGHSRFRSLTVSTDSATNQKHLTVFMRSLLKSMHDHADAWPFREPVDARDVPDYYEIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPDTIYYKCATRLEAHFQSKVQSGLQSGTKIQ 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1890 588 CDD Bromo_gcn5_like 480 578 - -
Lele14g1890 588 SUPERFAMILY Bromodomain 464 578 IPR036427 GO:0005515
Lele14g1890 588 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 245 396 IPR016181 -
Lele14g1890 588 PRINTS Bromodomain signature 509 525 IPR001487 GO:0005515
Lele14g1890 588 PRINTS Bromodomain signature 544 563 IPR001487 GO:0005515
Lele14g1890 588 PRINTS Bromodomain signature 495 508 IPR001487 GO:0005515
Lele14g1890 588 MobiDBLite consensus disorder prediction 120 139 - -
Lele14g1890 588 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 237 391 IPR000182 GO:0016747
Lele14g1890 588 CDD NAT_SF 284 338 - -
Lele14g1890 588 Pfam Bromodomain 485 567 IPR001487 GO:0005515
Lele14g1890 588 ProSiteProfiles Bromodomain profile. 492 563 IPR001487 GO:0005515
Lele14g1890 588 PANTHER GH11602P 60 584 IPR037800 GO:0004402
Lele14g1890 588 MobiDBLite consensus disorder prediction 97 112 - -
Lele14g1890 588 Pfam Acetyltransferase (GNAT) family 284 362 IPR000182 GO:0016747
Lele14g1890 588 ProSitePatterns Bromodomain signature. 497 555 IPR018359 -
Lele14g1890 588 Gene3D - 470 587 IPR036427 GO:0005515
Lele14g1890 588 MobiDBLite consensus disorder prediction 41 142 - -
Lele14g1890 588 Gene3D - 233 397 - -
Lele14g1890 588 MobiDBLite consensus disorder prediction 41 76 - -
Lele14g1890 588 FunFam Histone acetyltransferase KAT2A 234 398 - -
Lele14g1890 588 SMART bromo_6 473 582 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1890 Lele-ChrLele14 25430150 25437210 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele14g1890 Bromodomain 2.5e-22 No_clan