Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1886 ATGGAGAGTTCATCATCAATATCAATGGGTGAGCTGAACCTGAAGGACACAGAGCTAAGGTTGGGATTGCCAGGAAGCGACGAGCCAGAGAAACGTTGCAGTGTTGGAAGCAAAAGGAAATATTCAGCTGAGGAAACAAGTCGTGAGGAGGAATCAACAGGCAAGAGTAGTGACGCTAAAAGTGATCACGACCAGTCAGACAACGGCCCACCAGCAAAGGCACAAGTAGTTGGATGGCCACCAGTGAGAAGTTTCAGGAGGAATAATATGCAACAAAAGAATGAGGGAGAAGGTGGAAGGTACGTGAAAGTGAGCATGGCTGGTGCTCCATACTTGAGGAAGATAGATGTGAAGGTTTATAAGAGCTACCCAGAAGTGCTCAAGGCATTGGAAAATATGTTCAAGTGCACTTTCGGTGAATATTCAGAAAGGGAGGGATACCATGGATCTGAATATGTTCCCACATATGAAGATAAAGACGGTGACTGGATGCTTGTTGGAGATGTTCCATGGGAGATGTTCATATGCTCCTGCAAGAGGCTCAGAATCATGAAAGCATCTGAAGCTAAGGGTTTGGGTTCTCTATGA 588 0.4558 MESSSSISMGELNLKDTELRLGLPGSDEPEKRCSVGSKRKYSAEETSREEESTGKSSDAKSDHDQSDNGPPAKAQVVGWPPVRSFRRNNMQQKNEGEGGRYVKVSMAGAPYLRKIDVKVYKSYPEVLKALENMFKCTFGEYSEREGYHGSEYVPTYEDKDGDWMLVGDVPWEMFICSCKRLRIMKASEAKGLGSL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1886 195 Pfam AUX/IAA family 35 193 IPR033389 -
Lele14g1886 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 190 IPR003311 GO:0005634|GO:0006355
Lele14g1886 195 MobiDBLite consensus disorder prediction 1 97 - -
Lele14g1886 195 ProSiteProfiles PB1 domain profile. 99 186 IPR000270 GO:0005515
Lele14g1886 195 FunFam Auxin-responsive protein 94 195 - -
Lele14g1886 195 Gene3D - 94 194 - -
Lele14g1886 195 SUPERFAMILY CAD & PB1 domains 96 185 - -
Lele14g1886 195 MobiDBLite consensus disorder prediction 21 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1886 Lele-ChrLele14 25413721 25414419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1886 91 194 B3 DNA Binding Superfamily AT2G46530 34.615 1.01e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele14g1886 AUX_IAA 5.1e-55 CL0072