Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1885 ATGGAAGTTATTGGGCTGAAGAAGCAGGAGAAAATGGGGTTTGAGGAGACGGAGCTGAGGCTTGGACTGCCCGGAAATGGAGGCTCTGCTCCTGCTGAAGGAGGAGGAGAAGCTGCGAGGAAGAGAGGATTTTCTGAGACTCAGAATAATAGCACTGTGGATTTGATGCTGAATCTGTCTTCTTCCAAAGAAGCTGATCATTCCTCTGACAAACCCAACCAGAAGACCCTTCTTCCCGCCGATCCCGCCAAGCCTCCTGCCAAGGCCCAAGTGGTGGGATGGCCACCGGTGAGATCGTTCCGGAAGAATATGTTAGCTCAGAAGAAGAACGGAGAAGAGAGCGAGCAGAAAAGCAGCCATAATAATGGAAGCTTTGTGAAGGTGAGCATGGACGGAGCTCCATATCTTCGCAAAGTGGACCTCAAGATGTACAAGAGTTATCAAGACCTCTCCGATGCCTTAGGCAACATGTTCAGCTCCTTCACCATTGGGAATTGTGGATCACAAGGACTGAAGGATTTCATGAACGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAAGATGGCGACTGGATGCTTGTCGGTGATGTCCCTTGGGAGATGTTCGTTGAATCCTGCAAGCGCTTGCGTATTATGAAAGGAAAGGAGGCTATTGGGCTTGCACCAAGAGCCATGGAGAAATGCAAGAACCGAAGCTAG 726 0.4986 MEVIGLKKQEKMGFEETELRLGLPGNGGSAPAEGGGEAARKRGFSETQNNSTVDLMLNLSSSKEADHSSDKPNQKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESEQKSSHNNGSFVKVSMDGAPYLRKVDLKMYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1885 241 MobiDBLite consensus disorder prediction 1 94 - -
Lele14g1885 241 FunFam Auxin-responsive protein 118 233 - -
Lele14g1885 241 Pfam AUX/IAA family 16 232 IPR033389 -
Lele14g1885 241 Gene3D - 117 235 - -
Lele14g1885 241 MobiDBLite consensus disorder prediction 1 17 - -
Lele14g1885 241 SUPERFAMILY CAD & PB1 domains 114 222 - -
Lele14g1885 241 MobiDBLite consensus disorder prediction 43 63 - -
Lele14g1885 241 ProSiteProfiles PB1 domain profile. 123 223 IPR000270 GO:0005515
Lele14g1885 241 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 228 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1885 Lele-ChrLele14 25405229 25407346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1885 114 226 B3 DNA Binding Superfamily AT3G61830 33.628 7.35e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele14g1885 AUX_IAA 6.5e-85 CL0072