Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1869 ATGGAGGATGTTCAGGGTATTTCGGAAAACATTGTTGTTGGTTCTCACATTTGGGTTGGTGATCCAGAACAAGTTTGGATTGACGGAGAAGTACTGAAAATCAATGGAGAGGAAGTTGAGGTTCAAACTAGTTCTGGGAATAAGGTTGTTGCCTGTTTGTCAAAATTATATCCCAAGGACGCAGATGCTCCTGCTGATGGAGTTGATGATATGACCAAGCTTGCTTATTTGCATGAGCCAGCAGTGCTTCATAATTTAGCAACTAGATACAAGATGAATGAGATATATACTTACACCGGAAATATTCTTATTGCTGTCAATCCCTTTCAAAATCTTCTGCACTTGTATGACACTGATGTCATGCAACAGTACAAGGGAGCTATGGTTGGAGACTTAAACCCTCATGTATTTGCCATTGCTGAAGCCGCATACCGGGCAATGGTCAATGAGGAGAAAAGCAATGCTATTCTTGTTAGTGGTGAGAGTGGAGCTGGTAAGACAGAAACCACCAAAATGCTCATGCGTTATCTGGCATATTTGGGTGGCAATGCTGCAGCGGAAGGAAGTAGTGTTGAGCAACAAGTTTTAGAATCAAACCCAGTTCTTGAGGCATTTGGCAATGCAAAAACGGTCAGGAATAACAATTCCAGTCGTTTTGGAAAATTTGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTTGGAAACATTAAGTTTAAAAAATCAGAAGAAGACTCGTCAGTTTTAGCAGATGAAGAATCTAAGTACCATCTCGAAATGACAGCAGAACTTCTCAAGTGTGTTCCAAGTGCTTTGGAAGATGCACTTTGTAAGCGAATGATGATTACCCCAGAGGAAGTCATTAAGAGAAGTCTTGATCCTCTTGCTGCGACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTCGCTTATTTGACTGGTTAGTCAAAAAAATTAATGTCTCCATTGGGCAGGACCCCGGCTCAAAATGTATCATTGGAGTTCTTGACATATATGGCTTTGAAAGCTTTAAAACTAATAGTTTTGAGCAGTTTTGTATTAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACAAGGGAAGGGATTGATTGGAGCTACTTAGAATTCGTAGATAATCAAGATGCATTGGATCTTATTGAAAAGAAACCAGGTGGAATCATTTCTCTGCTTGATGAGGCATGTATGTTTCCAAAGTCAACTCATGAAACATTTTCTCAAAAGCTTTATCAGACTTTCAAAAATAACAAGCGCTTCATCAAGCCAAAATTATCTCAATCAGATTTTACCATTGTTCATTATGCAGGGGAGGTTCAGTATCAGTCTGAACAGTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAGCATCAAGACATGCTGAGTTCTTCCAAATGTTTTTTTGTAGCAGGCCTTTTCCCCCCACTTTCTGAGGAGACGGCCAAATCTTCTAAATTTGCTTCTATCGGTGCTCGCTTTAAGTTACAACTACAACAACTGATGGATACGCTAAAATCCACGGAGCCTCACTATATTAGATGTGTGAAGCCAAATAATGAATTAAAATCTTCTGTGTTTGATAATATGAATGTTATCCAACAACTTCGATCCGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTTCCAACACACAGGACCTTTCGTGATTTTTTGACTCGAGTGGCTCTTCTTGCTCCAGAGATTGTCAAAGAAAAGTATGTGTACCTTAACCCAGGTTTTGTTTATATGAAATTTTTACCAAGCAGTCTTAAGGTGACGCCAGATTCTGACATTTACTTGGTTTTTGGACTTGAAAACAATCCTCATATAAGCAGCTCTGATGAGAAAGATTCATGTATAAAGATTTTACAGAAGATTGGCCTTACAGGTTATCAGATAGGGGAATCAAAGATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGACGCTCAAAGGGCACTCCTCCTTAACAACTCCGCTATTGTTATCCAGAAACGGATCAAAACTCATCTGAATCAGAAAAGATATGTTACATTGCAAAAATCTTCTGTCTGCGTGCAATCTTTTTGTAGAGGAGAAGTGGCTCGGAGATCATATTATCTCATGAAGAGAAATGTAGCTGCTGTCAGAATTCAAAGGAATATTCGTGGAAAACTAGCCAGGAAAAAGTACAACCAACTATATACTTCTGCCATTGTATTTCAGACAGGCTTTCGGGCTATGGCAGCTCATGATGAATTGAGATATAGACTGGAAGCTAGTGCATCAATTAAACTTCAGGTTGTGGATAAAGCAGAGGAAATGGAAAGCCAGATTATGGAGAAAGCAGTGGAAAATGAAAGCCCTTGTGCGAAAGTATCCATAAATCATTGTATAGATACTGAAAGCATTCATGCTATCAAAGAATCCTCAAGTCCTTTCCAAGACTCTGAGAAGATTGAGGCTCTTACTTCAGAAGTCATAAATTTAAAGGTTATGTTGCATGCAGAAAAACAAAGAGCTGATGATTGTGAAAGGAAATATGTGGAAGCCGAAGAATCCAGAGAGGAGTTACTCAAAAAGCTAGCAGAAACAGAAAAAAGAGTATATCAGCTTCAAGACTCATTGAACAGGATGATATCTTCCATGTCAAGCCAAGTTGCGGAACTGAAATTGATATTAAGTACTTCATCAAGATTAAGTTCAACTTTTCGGCCTATTGCTAGAGTTGATGTTGCTTCCAGCAACTCTGATACTTCATCCACAGATTCTGATTTCACAGCTTCAGCTCCTGCTTCAAATACAACCAATCAGTCTAACTCCCAGTCTAGTTCTATTCAGCTAGTCGTTCAGGGTGTCACTGTAGCGGATGGTTCAGGTCAGTCCAGTTTTGTTGTAAATGTCATTGTCCTAGATATTTTTCCATTTAATTTGCTTGCTGAATTCAGAAAACTATGCATATATGAGGAGGACTATAAGTTGTGTTTGACCGTACCATTTTTTCCCCTTATTGTTGCACTTGCAGGATGTGAAACTGAAAAAGGAGGGGCATTTGATGATTTCTTCTAG 3120 0.3897 MEDVQGISENIVVGSHIWVGDPEQVWIDGEVLKINGEEVEVQTSSGNKVVACLSKLYPKDADAPADGVDDMTKLAYLHEPAVLHNLATRYKMNEIYTYTGNILIAVNPFQNLLHLYDTDVMQQYKGAMVGDLNPHVFAIAEAAYRAMVNEEKSNAILVSGESGAGKTETTKMLMRYLAYLGGNAAAEGSSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFDAIFRVVAAILHLGNIKFKKSEEDSSVLADEESKYHLEMTAELLKCVPSALEDALCKRMMITPEEVIKRSLDPLAATVSRDGLAKTLYSRLFDWLVKKINVSIGQDPGSKCIIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTREGIDWSYLEFVDNQDALDLIEKKPGGIISLLDEACMFPKSTHETFSQKLYQTFKNNKRFIKPKLSQSDFTIVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSSSKCFFVAGLFPPLSEETAKSSKFASIGARFKLQLQQLMDTLKSTEPHYIRCVKPNNELKSSVFDNMNVIQQLRSGGVLEAVRIKCAGFPTHRTFRDFLTRVALLAPEIVKEKYVYLNPGFVYMKFLPSSLKVTPDSDIYLVFGLENNPHISSSDEKDSCIKILQKIGLTGYQIGESKIFLRAGQMAELDAQRALLLNNSAIVIQKRIKTHLNQKRYVTLQKSSVCVQSFCRGEVARRSYYLMKRNVAAVRIQRNIRGKLARKKYNQLYTSAIVFQTGFRAMAAHDELRYRLEASASIKLQVVDKAEEMESQIMEKAVENESPCAKVSINHCIDTESIHAIKESSSPFQDSEKIEALTSEVINLKVMLHAEKQRADDCERKYVEAEESREELLKKLAETEKRVYQLQDSLNRMISSMSSQVAELKLILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTASAPASNTTNQSNSQSSSIQLVVQGVTVADGSGQSSFVVNVIVLDIFPFNLLAEFRKLCIYEEDYKLCLTVPFFPLIVALAGCETEKGGAFDDFF 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1869 1039 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 12 61 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 PANTHER MYOSIN 223 954 - -
Lele14g1869 1039 Gene3D - 680 729 - -
Lele14g1869 1039 Gene3D - 730 780 - -
Lele14g1869 1039 FunFam Class V myosin 344 486 - -
Lele14g1869 1039 ProSiteProfiles IQ motif profile. 728 754 IPR000048 GO:0005515
Lele14g1869 1039 Pfam Myosin head (motor domain) 68 222 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 Pfam Myosin head (motor domain) 224 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 Gene3D - 571 678 - -
Lele14g1869 1039 Pfam IQ calmodulin-binding motif 682 700 IPR000048 GO:0005515
Lele14g1869 1039 Pfam IQ calmodulin-binding motif 731 748 IPR000048 GO:0005515
Lele14g1869 1039 Pfam IQ calmodulin-binding motif 705 723 IPR000048 GO:0005515
Lele14g1869 1039 PRINTS Myosin heavy chain signature 96 115 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 PRINTS Myosin heavy chain signature 153 178 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 Coils Coil 851 892 - -
Lele14g1869 1039 MobiDBLite consensus disorder prediction 931 957 - -
Lele14g1869 1039 Gene3D Kinesin motor domain 328 567 IPR036961 -
Lele14g1869 1039 ProSiteProfiles IQ motif profile. 703 732 IPR000048 GO:0005515
Lele14g1869 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 728 IPR027417 -
Lele14g1869 1039 Gene3D Kinesin motor domain 66 222 IPR036961 -
Lele14g1869 1039 ProSiteProfiles Myosin motor domain profile. 66 677 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 SMART MYSc_2a 60 678 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 Gene3D Myosin VI head, motor domain, U50 subdomain 225 506 - -
Lele14g1869 1039 SMART iq_5 679 701 IPR000048 GO:0005515
Lele14g1869 1039 SMART iq_5 702 724 IPR000048 GO:0005515
Lele14g1869 1039 SMART iq_5 727 749 IPR000048 GO:0005515
Lele14g1869 1039 Pfam Myosin N-terminal SH3-like domain 14 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele14g1869 1039 Gene3D - 344 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1869 Lele-ChrLele14 25287206 25300108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1869 223 784 Myosins gene family AT1G54560 63.233 0.0 760