Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1863 ATGGAACATGATTTTGTTGGCCATAAAATAACTCCACCTGTAAAGTGCACTCATAACCCAGTCGGATTGCCTAACTTTCTTGCCTCTGGTCTTGGGCTTAAGCAAGTTGTTATTAGCGTTAAAAGCAAGCTCGGCTTAGTCTCTAATACTTCATTAGCCCTTGGGCTTTTGCCCATCCCCTTTATCTCAAGTGAGGAGCGAGAGAGAATCAAAGGGGAAAAGGCTCATCAGGATAAATTGTCGTTTTCTGTGAATTGGCGGGTATTGTTCTCCTGGAGAGTTTGTAAATCCTTCACAAGCAAATTTCTAAGCTTGAGGATACTGGACTTCGTGCTTCTTGTGGGAGTAATGGGGTTAATCCATAACCCTTTCTTCGGGGCTTCTTCGCTTCGTCAAAATTCTGTGAAGATGGCCACGAACATACGTCAATTACTCAGAAGTCTCTGTTTAAATACTGATTGGAAGTACGGCGTCTTTTGGAGACTCAAACATGGGGGTCGCATTATTGTTGGACAAGTAGCTCTCACTGGGAAGCACCAGTGGATCTATGCAGATGATCATGCTACGAGTTCTGGTTTGTCCTTTGAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTAGCTATTACCCCACATGGAGTTGTTCAACTTGGCTCCTTAAATAAAGTGATTGAAGATACAAGAGTTGTAACTCATATCAGAAATATTTTTTTGGCCAATCAAGATTACTCGCTAGGCCATGTTCCCAATCATATACAATGCAGGGTGACGAATTCTTCTGCTTCGCCATATGCACCAACAACAAAACTGTCTTCAGAAATTGGACCTGCTTGCTCACATGATGCAGAGGAAACCGCGAGGGTTGAAAAACTGGATGTTTTAATGCCCTTTACATGTTCTGCAAAGAACCTTCCACCTCCTTCTGTTTATCAGAAAATGGCTGTTGATGTGACCAAATATGGAGGGCCTGAGTTTTGCAGTGATGAAAGTTTGGTTTTGCTCAAGTCAGTATCAAATATGATGGATGTGGAGCATCAGAAATTTGTAGATATGAGACCTCTAAATGAGAAGTTTGAAGGGAGCAATAGTGGAGCAATAGATATTAGGGTGGAATCAGAAAGAAATGTTACATCCTTGCTACACAATTCAGTTATGGATAAAAACTTCAGTGATTCTGTAGGTCCATCTGAAAAAATTGGAGCTGGTTTTGCCTGCTTGCCTTCAGACTTTCATGATGTTGTTTGTGAACGGGATAAGTTGCGTTATTTAAATATTAGCCAGAAAGAGGCGTTGACTCTTGCCAAATCTTCAGATGCATGCTCCCGAAAAGGTACAGAAAAATCGGAGTTTCAGACTGCACTTTCTTACAACAGTACCTCAAATACAATGTCAAAATTCCCTGCTGGCTGTGAGCTACATGAAGCCCTTGGATCGGCTTTTGTGAGAAATGGATATTTTGATCTAGGGGTACAGGTGAATGAGGATCTTACAATGATGGAGATGCCGGATGAGATTAGCCGTAGCCAGTTGACTCATGAATCTTGTCCGGAGCATCTTCTGGAAGCAATAGTAGCCAATGCTTGTCATAGTATTAATGACATTAAGAGTGAACTATCATACTCTGCATCAGTGCAGTCGGCAGTGATATCTGAAAGAAATCCTGAAGCTTCCATGCACATAGCCCCTGCTATTAATTCAGAAGGATATTCAATGGAGTCTTCTCTTGTAAGAGAGGACATATTCCACTCTTTGACTTCATCATCATGTCCTAGTTCATGTAGTGAACGGTTTGAAAGATCTTCTGAACCTGGTAAGAACAAGAAGAGGGCTAGGCCTGGAGAAAGTGGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAATTGGTGCCAAATGGGGCAAAGTGCAGTATTGATTCATTACTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCATTAGTAAGCATGCTGACAAGCTAAATAAATTTACTGGTTCAAAGACAAAGTTGCATCACTTGGAATCAGCTGTTCCTGGATCCTCTAGCTATGAACAGGGTTCGAGTTGGGCAATGGAATTAGGTGGTCATTTGAAAGTTCATTCAATACTAGTGGAGAATCTTAGTAAGAATGGACATATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTGGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCATAGTGAGAAGACATTGATATGTTTTGTGGTTGAGGGCCAAAACAACAGAAATGTACACAGGTTGGATATATTGTGGCCGCTCGTTCAAATACTGCAGTCCAAGAGTGCAATGCATGAATAA 2412 0.4187 MEHDFVGHKITPPVKCTHNPVGLPNFLASGLGLKQVVISVKSKLGLVSNTSLALGLLPIPFISSEERERIKGEKAHQDKLSFSVNWRVLFSWRVCKSFTSKFLSLRILDFVLLVGVMGLIHNPFFGASSLRQNSVKMATNIRQLLRSLCLNTDWKYGVFWRLKHGGRIIVGQVALTGKHQWIYADDHATSSGLSFEFADGWQSQFSAGIRTIVVVAITPHGVVQLGSLNKVIEDTRVVTHIRNIFLANQDYSLGHVPNHIQCRVTNSSASPYAPTTKLSSEIGPACSHDAEETARVEKLDVLMPFTCSAKNLPPPSVYQKMAVDVTKYGGPEFCSDESLVLLKSVSNMMDVEHQKFVDMRPLNEKFEGSNSGAIDIRVESERNVTSLLHNSVMDKNFSDSVGPSEKIGAGFACLPSDFHDVVCERDKLRYLNISQKEALTLAKSSDACSRKGTEKSEFQTALSYNSTSNTMSKFPAGCELHEALGSAFVRNGYFDLGVQVNEDLTMMEMPDEISRSQLTHESCPEHLLEAIVANACHSINDIKSELSYSASVQSAVISERNPEASMHIAPAINSEGYSMESSLVREDIFHSLTSSSCPSSCSERFERSSEPGKNKKRARPGESGRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSISKHADKLNKFTGSKTKLHHLESAVPGSSSYEQGSSWAMELGGHLKVHSILVENLSKNGHMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEAHSEKTLICFVVEGQNNRNVHRLDILWPLVQILQSKSAMHE 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1863 803 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 618 667 IPR011598 GO:0046983
Lele14g1863 803 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 168 801 IPR043561 GO:0003700|GO:0006355
Lele14g1863 803 MobiDBLite consensus disorder prediction 606 631 - -
Lele14g1863 803 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 166 245 IPR025610 -
Lele14g1863 803 MobiDBLite consensus disorder prediction 596 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1863 Lele-ChrLele14 25243691 25249102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1863 137 799 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.401 1.65e-135 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1260 06 8020091 8022201 Lele14g1863 14 25243691 25249102 CCT
Lele07g1463 07 8898844 8901898 Lele14g1863 14 25243691 25249102 CCT
Lele08g1252 08 7959544 7961669 Lele14g1863 14 25243691 25249102 CCT
Lele05g1398 05 8832877 8838981 Lele14g1863 14 25243691 25249102 CCT
Lele14g1863 14 25243691 25249102 Lele15g0478 15 2795530 2802434 hybridization
Lele14g1863 14 25243691 25249102 Lele16g0498 16 2756650 2761452 hybridization