Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1861 ATGGCTTCCTCGGACTCTGTTTTACCATTATTCGCCATCGTCGTGCTCAGCATCATGGGCACAGCTTTCTTGCTCATCGGCTACTTCGCTTTAGTCACCAAATGCTTCTCTTACTGGCACCACCTCAACCCTCTCACGTGGCTCTCCATTGTTCGTCCCAGACACAGCGAAGAACCCTTCATAGCTCTCTCGCCCACCATGTGGAATCGTGGCCTTGATGAATCCATCCTCAGAGAAATACCCACATGTCAGTTCGTCAAAGTTGAGGGCCATGATGGTAGTATGAGTACTGTGTATGGGTGTGTGGTGTGTTTGAGTGAGTTTCAGCAACAGGACATGCTCAAAGTTCTACCCAAATGCAGCCATGCTTTTCACTTGGACTGCATCGATATTTGGCTCCAGAGCAACGCTAATTGTCCTCTTTGCAGATCAAGCATTTCTGGCACCACGCGTCCTCCATTGGACCATATTATAGCGCCGAGCTCTTCTCCTCAGGATTCTCGGCTACTCTCCAATATGGCCAGTGATGAAGACTTTGTGGTCATTGAATTGGGGGGAGAAGATGGCGGATCACTGTCCATGAGGCGACATGAACGGAATCAGTCGAGCGGGGGAAGCTTGGTACAGAGTACAAGTCACTGTACGAGGAAGATGAAATCGAGGAAGTGGCAGCGTGTGCCCATCATGGGAGATGAGTGTATTGATACGAGGAAGAAAGATGAACAGTTCTGTATTCAGCCCCTCAGGAGATCTTTCTCCATGGATTCTGCAAATGATAGGCAAGTTTGCTTGGAAGTTCGATCCATTACACAGCAGCCAAACGGGCATCATCAAAACGATGCAAGTGGGAGTGAAGACAGTAACAGTAACAGCAGAGGTCGAAGGTCTTTCTTTCCATTTCGTTATGGTCGTGGATCGAGAAAAGCAGTGCTTCCTCTGGAGAATGAGGCGAATGATTGCTTCCATGTTCTCCCGTCATGCGTATTTGGGAAGAGAGAATACAGAGCAGAGGGGCCCACCCAGAAGGCAATGGGAAGCCATGAGTAG 1047 0.4909 MASSDSVLPLFAIVVLSIMGTAFLLIGYFALVTKCFSYWHHLNPLTWLSIVRPRHSEEPFIALSPTMWNRGLDESILREIPTCQFVKVEGHDGSMSTVYGCVVCLSEFQQQDMLKVLPKCSHAFHLDCIDIWLQSNANCPLCRSSISGTTRPPLDHIIAPSSSPQDSRLLSNMASDEDFVVIELGGEDGGSLSMRRHERNQSSGGSLVQSTSHCTRKMKSRKWQRVPIMGDECIDTRKKDEQFCIQPLRRSFSMDSANDRQVCLEVRSITQQPNGHHQNDASGSEDSNSNSRGRRSFFPFRYGRGSRKAVLPLENEANDCFHVLPSCVFGKREYRAEGPTQKAMGSHE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1861 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 148 IPR013083 -
Lele14g1861 348 SMART ring_2 101 142 IPR001841 -
Lele14g1861 348 PANTHER RING-H2 FINGER PROTEIN ATL16 3 314 IPR044600 GO:0016567|GO:0016740
Lele14g1861 348 FunFam E3 ubiquitin-protein ligase ATL6 62 149 - -
Lele14g1861 348 SUPERFAMILY RING/U-box 94 147 - -
Lele14g1861 348 MobiDBLite consensus disorder prediction 270 296 - -
Lele14g1861 348 MobiDBLite consensus disorder prediction 196 211 - -
Lele14g1861 348 MobiDBLite consensus disorder prediction 190 211 - -
Lele14g1861 348 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Lele14g1861 348 MobiDBLite consensus disorder prediction 270 295 - -
Lele14g1861 348 CDD RING-H2_PA-TM-RING 101 143 - -
Lele14g1861 348 Pfam Ring finger domain 101 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1861 Lele-ChrLele14 25231067 25232339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1861 2 267 C3H Transcription Factor Family AT1G04360 43.243 1.40e-65 210