Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1860 ATGGAAGAGGGGACGATGAGCGGCGGCAATCAGAACGGAGAGGTGAGATACAGGGGTATCCGGAGGAGGCCGTGGGGCAAGTTTGCCGCCGAGATCCGTGACCCGACCCGAAAAGGGGCTCGCATTTGGCTCGGAACCTTCGACACCGCCGAGGAGGCTGCTCGGGCTTACGACTCCGCCGCTTTCCATTTTAGGGGTCACCGAGCTATTCTCAATTTCCCCAACGAACATCACTCTCTTTATCCCCCTACTTCTTCACTGCCCCTGCCTCTGCCTCTACCCACTTCTTCTTCCTCCTCTTCCTCTTCGAGAATTCCGCCACCCGACACCGACTGCGGTGCTGTGGAGTTTGAATACTTGGACAACAACTTGCTGGATGAACTCCTCCAACAACAAGGTTATTACGGCCATCCTAACTTCCCCAAGTGA 429 0.5594 MEEGTMSGGNQNGEVRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEEAARAYDSAAFHFRGHRAILNFPNEHHSLYPPTSSLPLPLPLPTSSSSSSSSRIPPPDTDCGAVEFEYLDNNLLDELLQQQGYYGHPNFPK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1860 142 FunFam Ethylene-responsive transcription factor 2 15 75 - -
Lele14g1860 142 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Lele14g1860 142 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Lele14g1860 142 PANTHER DNA-BINDING DOMAIN 14 100 IPR044808 GO:0003700|GO:0009873
Lele14g1860 142 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Lele14g1860 142 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Lele14g1860 142 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Lele14g1860 142 MobiDBLite consensus disorder prediction 91 107 - -
Lele14g1860 142 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Lele14g1860 142 MobiDBLite consensus disorder prediction 81 112 - -
Lele14g1860 142 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Lele14g1860 142 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1860 Lele-ChrLele14 25229308 25229736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1860 12 132 AP2-EREBP Transcription Factor Family AT3G23230 53.543 3.01e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g1860 AP2 6.5e-15 CL0081