Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1853 ATGACTGAGAAGCTGCTGTGCCTGCAGCATGAATATGAAAAAGGAGACATACCCTTGAAATGGCCTTTGGTGAAAACTAGGGAGGGGCAGGGTCTCGGACATCGAACAGATTTACCCGCAAACAGGACAGCCACTTTAATTTGCTACAATGAAGATCTTTACAGTGAGCATCACTCGCTAGTATATTTGAGACACGCCTTTGATTTACCTGGAGATTTTGGTTCAATTCCGCACATAAATCTCAGTACTAAAGTTAGGGTTTCGTCAAACCGAATCATGCCGTCCCTGATTTCTCCTGGGAAAATCCATCGCTTGGAGATGGAAAATTTCAAGTCTTACAAGGGTCTTCAAGTCATTGGCCCCTTCTACGACTTCACCGCAATTATTGGCCCCAATGGTGCTGGCAAGTCCAACCTTATGGACGCCATTAGCTTTGTGCTTGGTGTGAGGACAGGTCACCTGCGTGGTGCTCAACTCAAGGACTTAATCTACGCGTACGACGACAAGGAAAAGGAGCAGAAGGGACGGAGGGCGTTCGTTCGTCTGGTTTTTCAGCTGGGCAATGGGTCGGAGATCCAGTTCACAAGGACTATCACGAGCGCCGGCGCGAGCGAGTACCGCATTGATGGGAGCCTCGTAACGTGGGATGTGTATAATGCCAGACTAAAGTCACTTGGCATTCTTGTCAAGGCTCGCAATTTCCTCGTGTTTCAGGGTGATGTGGAATCCATTGCATCGAAGAATCCGAAAGAGCTTACTGCCCTTCTTGAGCAGATATCTGGCTCTGATGAGCTCAAGAGAGACTATGAACGATTTGAAGAAGAAAAGGCCACAGCTGAAGAAAAGTCAGCCCTTGTTTATCAGAAGAAGAAGACTGTAGTTATGGAGAGAAAGCAGAAGAAGGAGCAAAAGGAAGAAGCGGAGAAACATATGCGTTTGCAGGATCAACTGAGAACTATAAAGAAAGAGCATTTCTTGTGGCAATTGTTCAATATAGAAAGAGATATAGAAAAGACGTCTGATGATCTTGGGGATGAGAAAAGAAGTCGTGAAGGCGTCATGGAAGAACTGGAAAAATTTGAAGCTGAAGCTAGTAAAAAGAAGAAAGAACAGGCAAAATATCAGAAAGAGATTACCCAATGCGAAAAGAGAATTGGTGAGAAAAGCAACAAACTTGACAGGAATCAACCTGATCTTCTGAAGATGAAAGAGGAAATGGCTCGTATCAACTCAAAAATAAAAAAAGGGAAGAAGGAGCTAGACAGAAAAAAAGAAGAACGGAGAAAACATGCTAATGATATAACAGAGCTACAGAGGGGTATACGAGATCTCTCTGCCAAATTGGAAGATCTACAGGCAAAGAGTCGAGATGTTGGTGATGAACTAAAGTTAGATGGCAGTGACTTGGAAGAATATTTTCGAATCAAAGAGGAAGCTGGGATGAAAACTGCAAAGCTAAGGGAGGAGAAAGAACTTCTGGATAGGCAACAACATGCAGATAGTGAAGCTAAAAAAAATTTGGATGAAAATCTTCAGCAATTAAAGAATAGGGAGTCTGAATTGAATTCACAAGAGGAACAGATGCGCACTAGGCTGAAAAAAATTCTTGATAATTCTACAAAACATAAGGATGACCTTGCAAATTTGATTAAGGAATTGCATGTGATGCAGGATAAACATCGAGATTCCAGGAAGAAATATGAAAATTTGAAGTTGAAAATTGGGGAAATAGAAAATCAACTTCGTGAACTGAGGGCTGATCGATATGAAAATGAGAGAGATGCAAAACTGTCTCAAGCTGTGGAGAGCCTCAAACGCCTGTTTCAAGGAGTCCATGGTCGCATGACTGGTCTTTGTAGGCCGACACAGAAGAAGTATAACCTAGCTGTTACTGTTGCTATGGGTAAATTTATGGATGCGGTTGTAGTTGAGGATGAAAAGACTGGAAAGGAATGCATCAAGTATTTGAAAGATCAGAGGCTTCCTCCTCAGACATTTATTCCTTTGCAATCAGTTCGCGTGAAGCCAATTATTGAAAGATTGCGCACATTAGGTGGCACTGCAAAGCTGTTCAAGTTTGATCCTGCCTTGGAGAAGGCAATTCTCTTTGCCGTTGGGAATACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAGTTTTGAGCTGGAGTGGTGAGAGGTTCAAAGTTGTAACTGTGGATGGAATTCTGCTGACAAAATCTGGCACAATGACTGGCGGCACTAGCGGTGGAATGGAGGCTAGGTCAAAACAGTGGGATGACAAAAAGATTGAAGGCCTTAAGAAAAAGAAAGAGCAGTATGAATCAGAGTTGGAAGAGGTAGGATCGATAAGAGATATGCACCTTAAGGAGTCTGAAGCCTCTGGAAAAATTAGTGGACTTGAAAAGAAAATTAAATATGCTGACATTGAGAAGAAAAGCATTGAAGACAAGCTTTCAAATTTGAAGCGGGAGAAAGAGATAATCAAAGAGGAAATAGAACGGATCAGTCCAGAACTTCAGAAGTTAAATGGCACTGTTGATAAGAGGAATGCTGGCATACGTAAGCTGGAGAAGAGGATCAATGAAATTACTGATAGGATTTACAAAGATTTCAGCAAGTCGGTTGGGGTTGCTAACATTCGTGAGTATGAAGAAAATCAACTCAAGTCTGCCCAAAATATAGCAGAGGAGAGGCTAAGCTTGAGCAGCCAGCTATCGAAATTAAAATATCAGTTGGAGTATGCACAAAATCGGGATATGACTACACGTATTAGAGAACTGGAATCTTCTTTGAGTGCTCTTGAACATGATTTAAAGCAGGTACAGCACAAAGAGGCTGAAACAAAGTTGGCAGCTGAGAAAGCTACTGAAGACATTGACCAGTTGAAGGAAGAAGTTCAGGAGTGGAAATCGAAGTCGGAAGATTGTGAGAAGGATATCCAAGAGTGGAAGAAGCGTGCTTCTTCAGCTACAACAAGCATATCTAAACTTAATCGTCAGATAAACTCAAAGGAGGCCCAGATTGAGCAGTTAATTGTGCAGAAACAAGACATTGTGGAAAAGTGTGAACTAGAACAACTTAGCCTGCCAATTGTAGAAGATCCAATGGATACTGGTACTTCAATACCAGGTCCAGTTTTTGATTTTGATCAACTAAGTAGGGCAATGAAGGATAGGAGGAACTCCGACAGGGATAAAATTGAGGTTGATTTTAAGCAGAAAATGGATTCTCTGACATCTGAAATTGAAAGAACAGCACCAAATTTGAAGGCATTAGATCAATACGAGGCTTTGGTGGAAAAGGAAAGAGCTGTAACTGAAGAGTTTGAAGCCGTCAGGAAAGAGGAGAAGGAGAAGGCTGATAGGTTCAATGCAGTTAAGCAGAAGAGGTATGAGTTGTTCATGGATGCTTTCAACCACATATCCGGTAATATAGATAAGATATACAAACAACTTACAAAGAGCAACACGCATCCGCTGGGTGGAACAGCATACTTAAACTTGGAAAATGAAGATGATCCATTTCTGCATGGCATCAAGTACACTGCTATGCCCCCAACAAAGCGCTTTCGCGATATGGAGCAACTATCTGGTGGGGAGAAGACTGTTGCTGCACTTGCTTTGCTATTCTCCATCCACAGTTACAAGCCTTCACCTTTCTTCATATTGGACGAAGTTGATGCTGCATTGGACAACTTAAATGTTGCAAAGGTTGCTGGATTTATTCGTTCGAAATCTTGTGAGGGAGCAAGGGGTAGTCAAGATGCCGATGGTGGCAGTGGCTTTCAAAGTATTGTGATATCCTTGAAAGATAGCTTTTATGACAAAGCTGAAGCATTGGTTGGGGTTTACCGTGACTCAGAGAGAAGCTGTTCGAGAACTCTGACATTTGACCTGACCAAATACCGAGAGTCCTAA 3918 0.4216 MTEKLLCLQHEYEKGDIPLKWPLVKTREGQGLGHRTDLPANRTATLICYNEDLYSEHHSLVYLRHAFDLPGDFGSIPHINLSTKVRVSSNRIMPSLISPGKIHRLEMENFKSYKGLQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGHLRGAQLKDLIYAYDDKEKEQKGRRAFVRLVFQLGNGSEIQFTRTITSAGASEYRIDGSLVTWDVYNARLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYERFEEEKATAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHMRLQDQLRTIKKEHFLWQLFNIERDIEKTSDDLGDEKRSREGVMEELEKFEAEASKKKKEQAKYQKEITQCEKRIGEKSNKLDRNQPDLLKMKEEMARINSKIKKGKKELDRKKEERRKHANDITELQRGIRDLSAKLEDLQAKSRDVGDELKLDGSDLEEYFRIKEEAGMKTAKLREEKELLDRQQHADSEAKKNLDENLQQLKNRESELNSQEEQMRTRLKKILDNSTKHKDDLANLIKELHVMQDKHRDSRKKYENLKLKIGEIENQLRELRADRYENERDAKLSQAVESLKRLFQGVHGRMTGLCRPTQKKYNLAVTVAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLFKFDPALEKAILFAVGNTLVCDDLEEAKVLSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGLKKKKEQYESELEEVGSIRDMHLKESEASGKISGLEKKIKYADIEKKSIEDKLSNLKREKEIIKEEIERISPELQKLNGTVDKRNAGIRKLEKRINEITDRIYKDFSKSVGVANIREYEENQLKSAQNIAEERLSLSSQLSKLKYQLEYAQNRDMTTRIRELESSLSALEHDLKQVQHKEAETKLAAEKATEDIDQLKEEVQEWKSKSEDCEKDIQEWKKRASSATTSISKLNRQINSKEAQIEQLIVQKQDIVEKCELEQLSLPIVEDPMDTGTSIPGPVFDFDQLSRAMKDRRNSDRDKIEVDFKQKMDSLTSEIERTAPNLKALDQYEALVEKERAVTEEFEAVRKEEKEKADRFNAVKQKRYELFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARGSQDADGGSGFQSIVISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKYRES 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1853 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 949 1296 IPR027417 -
Lele14g1853 1305 Pfam RecF/RecN/SMC N terminal domain 102 1287 IPR003395 -
Lele14g1853 1305 Coils Coil 560 594 - -
Lele14g1853 1305 Coils Coil 343 384 - -
Lele14g1853 1305 SMART SMC_hinge_2 609 721 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lele14g1853 1305 PIRSF SMC 100 1301 IPR024704 GO:0005524|GO:0016887
Lele14g1853 1305 Gene3D - 100 305 IPR027417 -
Lele14g1853 1305 Gene3D - 929 1304 IPR027417 -
Lele14g1853 1305 FunFam Structural maintenance of chromosomes 1A 101 316 - -
Lele14g1853 1305 CDD ABC_SMC1_euk 1184 1299 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Lele14g1853 1305 Gene3D - 588 669 - -
Lele14g1853 1305 SUPERFAMILY Smc hinge domain 573 770 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lele14g1853 1305 Coils Coil 262 282 - -
Lele14g1853 1305 CDD ABC_SMC1_euk 102 249 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Lele14g1853 1305 Coils Coil 763 783 - -
Lele14g1853 1305 Pfam SMC proteins Flexible Hinge Domain 609 719 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lele14g1853 1305 Coils Coil 290 323 - -
Lele14g1853 1305 Gene3D - 324 478 - -
Lele14g1853 1305 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 100 1305 - -
Lele14g1853 1305 Coils Coil 917 1021 - -
Lele14g1853 1305 Gene3D - 670 748 - -
Lele14g1853 1305 Coils Coil 399 461 - -
Lele14g1853 1305 Coils Coil 497 531 - -
Lele14g1853 1305 Coils Coil 804 831 - -
Lele14g1853 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 1246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1853 Lele-ChrLele14 25190673 25204433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1853 99 421 Structural Maintenance of Chromosomes family AT5G15920 24.615 2.14e-08 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1853 14 25190673 25204433 Lele16g0511 16 2808934 2813312 hybridization