Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1851 ATGGGTCTGAGAGACATAGGGGCTTCGCTTCCTCCTGGGTTTCGTTTCTATCCGAGCGATGAGGAGCTGGTTTGTCATTACCTCTACAAGAAGATCACCAATGAGGAAATTCTCAAAGGCACTTTGGTCGAAATTGACCTGCACACATGCGAACCATGGCAGCTTCCAGAGGTGGCGAAGCTGAACGCAAGCGAATGGTACTTCTTCAGCTTCAGGGACCGTAAGTACGCAACAGGATTCCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACTGGGAAGGACAGGACAGTGCTGGACCCAATGACGCGAGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCCCCCCATGGTATGAAAACTGGTTGGATCATGCACGAATTCCGCTTGGAGACCCCACACGTGCCCCCCAAGGAGGACTGGGTTTTGTGTAGGGTATTTCACAAAAGCAGAGCAGACAACGGTACCAAACTCAGCCCACACGATATGTTTGAGACTGCACCTTCGTTTAGTTTTCCTTCTTCGTCTCCAACCAATCAAATCGAGACTCCTGGCTTCAACACTTTCACCTCCATGCCACCCCTTCATGATTACCAGTACCAGAACCATGACAGTTCTCTAATGAATCTCCTCCAATTTTCTCTGGAAACAAACACGGGCACTACTGTTGTCAGTCAAAGTATTCCAAGAGGCGATCATGTAGGATATGACGATGGGTTCTTATGGGACATGGGCCTGGAAGAAAACAGCATCCACCACCACAATGACGTGGCATCAAACAATGACGGAATGAGATTCGAAGCTGATAACGATAGTATGGGTTTTTGTTTACTTGGGCCAGGCATTAAAGCTTATAGGCAACAACTTTCTACAACAATAGAGTACAATTTTGATGGACAATCGGATTGTTTGGAGCAGACGTCAATGAAAGAAGGCCCTGGTTTTGAAGAGTCTATGACTTTATTCCCATTAAGAACATGGCTTCCCCTGATTGCGACGACGAAGAAGATGAAGATGAACAACACTCGCTTGCCAAAGATTCTCAAGGACAACAATGATAATAAGAACTCTGATGAGAAAAAATCCAACTCGGCTTAG 1119 0.4692 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNASEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPMTREVVGMRKTLVFYRNRAPHGMKTGWIMHEFRLETPHVPPKEDWVLCRVFHKSRADNGTKLSPHDMFETAPSFSFPSSSPTNQIETPGFNTFTSMPPLHDYQYQNHDSSLMNLLQFSLETNTGTTVVSQSIPRGDHVGYDDGFLWDMGLEENSIHHHNDVASNNDGMRFEADNDSMGFCLLGPGIKAYRQQLSTTIEYNFDGQSDCLEQTSMKEGPGFEESMTLFPLRTWLPLIATTKKMKMNNTRLPKILKDNNDNKNSDEKKSNSA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1851 372 MobiDBLite consensus disorder prediction 355 372 - -
Lele14g1851 372 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Lele14g1851 372 MobiDBLite consensus disorder prediction 349 372 - -
Lele14g1851 372 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 223 - -
Lele14g1851 372 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lele14g1851 372 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele14g1851 372 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1851 Lele-ChrLele14 25164514 25172775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1851 6 180 NAC Transcription Factor Family AT1G56010 53.552 1.45e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele14g1851 NAM 4.4e-37 No_clan