Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1847 ATGGCCGACGACGAAGGAACTCGGAGGCAGAGAAGCGAAGATAAGGAAGAAGATGAAAATGAAAGCTGCAGTGGAATTAGAGTGTGTGGTATGCAATTCGCCTACGATGGGCAACCACCACTCTTTGTCGACTTCAACCTTAAGATCTCTACTGGATCGCGATGCCTTCTGGTGGGTGCCAATGGATCCGGGAAGACCACTTTGCTGAAAATTCTGGCTGGCAAGCATATGGTCGGAGGAAGAGATGTTGTACGGGTACTAAATTGTTCCGCTTTCCACGATACTCAACTAGTTTGCAATGGTGATCTCGCCTATTTGGGAGGATCCTGGAGTAAAACCGTTGGCTCAGCAGGAGAAATTCCGCTCCAGGGAGACTTCTCAGCTGAACATATGATATTTGGAGTTGAGGGCGCAGATCCTGAAAGGAGAGATAAGTTGATTGAGTTGCTTGATATAGATCTACAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGCCGAGTGCAAATTTGCATGGGTCTTCTTCATCCATATAAGGTTCTCTTGCTGGATGAGGTTACTGTGGACCTAGACGTTGTGACTAGGATGGATTTGCTGGACTTCTTCCGGGAGGAATGTGAGCAGAGAGGAGCGACAATTGTGTATGCAACTCATATTTTTGATGGCCTGGAGACATGGGCCTCTCATCTAGCATACATACAAGACGGTGAACTGAGGAGGGCGGAAAAGTTATCAGATATTAGTGAGTTGATGCGTTCGTCTAATCTGCTCTCTGTTGTTGAGTCATGGCTCCGTGCTGAGACAAAGCTTGAAAAGAAGAACCCTGTAAACCATGCTTCCAGCGTCCAAAAGACTTCTTTTGGTAGTTCACCTTTTATTTCATCAAGACACATGGCATACTATCGGTAG 912 0.4682 MADDEGTRRQRSEDKEEDENESCSGIRVCGMQFAYDGQPPLFVDFNLKISTGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNCSAFHDTQLVCNGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGADPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQRGATIVYATHIFDGLETWASHLAYIQDGELRRAEKLSDISELMRSSNLLSVVESWLRAETKLEKKNPVNHASSVQKTSFGSSPFISSRHMAYYR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1847 303 Gene3D - 24 287 IPR027417 -
Lele14g1847 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 251 IPR027417 -
Lele14g1847 303 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 27 264 - -
Lele14g1847 303 Pfam ABC transporter 44 188 IPR003439 GO:0005524
Lele14g1847 303 MobiDBLite consensus disorder prediction 1 23 - -
Lele14g1847 303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 261 IPR003439 GO:0005524
Lele14g1847 303 FunFam ABC transporter I family member 21 126 298 - -
Lele14g1847 303 SMART AAA_5 51 238 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1847 Lele-ChrLele14 25139421 25142107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1847 31 239 Calmodulin-binding Proteins AT2G36910 22.072 1.74e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1847 14 25139421 25142107 Lele15g0497 15 2925812 2932149 hybridization
Lele14g1847 14 25139421 25142107 Lele16g0518 16 2872118 2874814 hybridization