Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1846 ATGGATTCCGCAAGGAGCTGGTTGCAAAAGTTACAACCACGAGATAAAATGAGGTCGTCGTCAAAGAAAAAGGATGATAGTGCTGGAGTAGATTCAAATCAACCGGTAGATGAAGAAGCTCTTTCCATTACCACAAAACAGAAGGTTGCTGCAGCCAAGCAGTACATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGGTGATGTCTCAGAGGAAGATCAAAGCAACCTTCTTAAGTTTCTGGAGAAGAAGGAAACAGAATATATGCGCCTTCAGAGGCATAAGATGGGCGTTGATGATTTTGAGTTATTAACTATGATTGGAAAAGGTGCATTTGGAGAGGTCAGGGTCTGCAGGGAAAAGACAACAAGCAATGTGTATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAGAGCTGAAAGGAACCTCCTTGCTGAGGTTGACAGCAATTGTATAGTCAAACTTTATTGTTCTTTCCAGGATGATGAGTATCTGTATCTTATTATGGAGTATCTTCCTGGTGGGGATATGATGACCCTTCTTATGAGAAAGGATATCTTGACTGAAGATGAAGCCAGATTTTACGTAGCTGAAACAGTTCTGGCTATTGAATCTATTCATAAACACAATTATATCCATCGGGATATCAAGCCTGATAATTTCACACTTCAAGAAGATGATTTTTCAGTAGGTCAGAATGCAAATGGATCTACACGGAATGATGAACGCTCAGCTCCAAAACGCACACAACAAGAACAACTACAACACTGGCAGAAGAACAGAAGAACACTTGCTTATTCTACCGTTGGCACACCTGATTATATTGCCCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCGCTTGGTGCTATTATGTATGAAATGTTGGTGGGGTATCCTCCTTTTTATTCAGATGATCCAATGTCAACATGTAGAAAGATAGTAAATTGGAAATCTCACTTGAAGTTTCCTGAAGAGGCAAGGCTATCTCCAGAGGCTAAAGATCTTATTAGGAAACTTTTATGTAATGTCAACCACAGACTAGGGTCAAACGGTGCTGGTGAAATAAAGGCTCATCCATTCTTCAAAGGCGTGGAATGGGATAAGCTATATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAATTAGATACTCAGAATTTTGAGAAGTTTGAAGAGGCAGAGATCCATAATCACCAAGCAGCAAGATCTGGGCCTTGGAGAAAGGTAATCTTCGGAGTATGCTTCTCTGTTTGCAATTTGTCTGCAAGTTATCAGCATGTGCATAATCTTCTGTTGACGGATATGATGCTCTCGTCTAAGGACTTAAATTTTGTCGGGTACACATACAAGAATTTTGAAATTGTCAATGACGATCAAATTCCTGGGATGGCTGAATTGAAGAAGAAAACCTCCAAATCAAAGAGGCCATCTATCAAGTCACTTTTTGAGGGTGAGTCAGAAACCTCAGAGGTGTCTGGGTCTTCAGATGCGCCTGCAGGCAATCAATCTGCTCAAGGGAGCTTTCTAAGCCTCTTGCCACCCCGTTTAGAGGTGTCTCATAAAGACAAAGAAACCTCCTAA 1686 0.4116 MDSARSWLQKLQPRDKMRSSSKKKDDSAGVDSNQPVDEEALSITTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADGDVSEEDQSNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTSNVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVAETVLAIESIHKHNYIHRDIKPDNFTLQEDDFSVGQNANGSTRNDERSAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLIRKLLCNVNHRLGSNGAGEIKAHPFFKGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEEAEIHNHQAARSGPWRKVIFGVCFSVCNLSASYQHVHNLLLTDMMLSSKDLNFVGYTYKNFEIVNDDQIPGMAELKKKTSKSKRPSIKSLFEGESETSEVSGSSDAPAGNQSAQGSFLSLLPPRLEVSHKDKETS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1846 561 ProSiteProfiles Protein kinase domain profile. 118 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1846 561 CDD STKc_NDR_like 116 485 - -
Lele14g1846 561 Pfam Protein kinase domain 119 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1846 561 Gene3D Transferase(Phosphotransferase) domain 1 202 414 - -
Lele14g1846 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lele14g1846 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 395 494 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele14g1846 561 SUPERFAMILY Protein kinase-like (PK-like) 92 440 IPR011009 -
Lele14g1846 561 Gene3D Phosphorylase Kinase; domain 1 90 423 - -
Lele14g1846 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 464 - -
Lele14g1846 561 Coils Coil 60 80 - -
Lele14g1846 561 MobiDBLite consensus disorder prediction 253 276 - -
Lele14g1846 561 MobiDBLite consensus disorder prediction 501 516 - -
Lele14g1846 561 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Lele14g1846 561 MobiDBLite consensus disorder prediction 501 561 - -
Lele14g1846 561 SMART pkinase_C_6 395 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele14g1846 561 MobiDBLite consensus disorder prediction 517 544 - -
Lele14g1846 561 Pfam Protein kinase C terminal domain 413 484 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele14g1846 561 MobiDBLite consensus disorder prediction 9 31 - -
Lele14g1846 561 SMART serkin_6 118 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1846 561 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Lele14g1846 561 MobiDBLite consensus disorder prediction 1 42 - -
Lele14g1846 561 FunFam Non-specific serine/threonine protein kinase 202 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1846 Lele-ChrLele14 25130680 25136023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1846 1 557 AGC Kinase Gene Family AT3G23310 67.979 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele14g1846 Pkinase 3.2e-57 CL0016