LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele14g1834	ATGTCTCCTCCTGCTTCTCATAAGCTTCTTCGTTTCACTCATCTTCAGGCGAATGCAGACAGTAATCCACATGAGTTGCTTGCCCATTCTCAAGCTTCATCTGCATCTTCTGCTCCAACAGTTGCTGGTAAAGATTCCGACGGCAAGATTGTGGGATGCAAATATGGACAAAAAGATGAGCAAGGCGAGGACGATGATTCCCTTTCGAGGCAGCCGTTATGGCGCAAAGTGCCAGTACCTTCAAACCTGATCAACCCATACCGAATAGTCATTGTGCTGCGTCTGGTCGTCCTAGCTTTCTTCTTCCGCTTCCGGATTTCGAATCCAGTTCACGATGCATACTCCTTATGGCTCATCTCTGTAATCTGTGAAGTCTGGTTTGCTCTGTCTTGGATTATTGATCAACTTCCCAAATGGTTCCCCATCACGCGCGAAACTTACCTGGACCGCTTGTCCATTAGGTTTGAGCACAAAGAGCCAAACCGTCTAGCCCCAATTGATGTGTTTGTAACTACTGTGGACCCGTTGACGGAACCACCAATTGTAACGGCAAACACGGTTCTCTCAATCTTGTCCGTTGATTACCCCGTTGAGAAGGTCACCTGCTATGTCTCCGATGACGCTGCGTCTCTTCTTCTTTTTAATACTCTATCTGAAACTGCCGAATTCGCAAGAACATGGGTTCCGTTCTGCAAGAAGTATGACATTGAGCCACGGGCACCTGAGTTCTATTTCTCCCAGAAAGTTGATTACTTCAAAGATAAAGTGCACCCCGCATTTGTTAAAAAACGCAGGGCCATTAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGCATTGGTGGCTAAGGCTCAGAAAAGACCAGAGGACGGGTGGGTGATGCAGAATGGCATGCCATGGCCAGGGAACAACGCTCACGATCATCCAGGAATTTGTCAGGTCTCTTTGGGAGGTGCTGGTACTCTGGATGTTGAAGGCAAGGAATTGCCACGGCTTGTGTATGTTTCACGTGAAAATCGCCCTGGCTATCAATACCACAAAAAAGCTGGTGCCTTGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTACAAATGCCCCTTTCTTGTTGAATATGGATTGTGACCACTACATCAATAATAGCAAGGCAATAAGGGAGGCTATGTGCTTTCTAATGGACCCTCATGGAAGGGGCCTCTGTTTTGTCCAATTTCCATTGAGTTTCGATGGCATGGATAGCCGTGATGGATATGCTAATCACAATGCCCTTTTTTTTAATATCAACATGAAAAGCCTCGATGGGATTCAAGGTCCGGAATATTTTGGTACTGGATGTGTATTTAACAGGCGGGCTTTATATGGCTATGATCCACAAATAGTTAAGAGAGGCTCAAAGATTAATTGCGACTGGTGGCCTTTGTGGTGTTGCTGTTGTTGCAGTGGTTCTGATTCCGAGTTTGATCTTGAAGAGATGGATGAAAATCTTGAAGAGTATGATGAACTAGAAATATTTGATCTGGAGGACATGGAAGAATCGCTTGAAAGTTCTGACGTGGAAGAAATACTAGAAATACTTGATCTTGACCAGAGTGAAGAAGAGCATGAAGGTTATGAGGAACCAGAGGAACCATCCCTCATGTTACAGGAAAATTTTGTGAAACGATTTGGGCAGTCACCGATTTTTATTGCTTCCACTTTAAGTGGGGCTGGTGGAGTTTCAAAAGGCGCTAATGCTATGAAGGAGGCCATCCATGTTATGTGTTGTGATTACGAAGAGAAAACAGAATGGGGCAAAGAGATTGGTTGGATTTATGGCTCAGTCACGGAAGGTATCTTGACTGGTTTTAAGATGCATTGTAGAGGATGGAAATCAGCGTACTCCATCCCAAAAAGAGCAGCTTTCAAGGGATTTGCTCCAGTAAATCTTTCAGATCAATTATGCGAAATTTTGAGACGGGCTCTTGGTTCTGTTGAGATAGTCTTTAGTCGACATTGCCCTATGTGGTATGGCTTTAAAGGAAAACTGAAGTGGCTTCAGAGGCTGGCTTATACTAATACCATTGTTTACCCAATCACTTCCATCCCTTTGCTAATATACTGTACAATTCCTGCTATCTGTCTCCTGACAGGAAAGTTCATCCTGCCAACATTGACAAATCTTGATAGCATATGGTTAATGGCGCTTTTTATCTCCATCATCTTAACTTGTGTGCTGGAGCTTCGATGGAGTGGGGTTAGCATGCAAGACTGGTGGCGCCATGAGCAACTCTGGATCATTGGAGGTGTTTCTTCCCATTTGTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGTTACTGGAGCAGATACTGATTTCGTTGTCCGGCCAAAAACAACAAGTCACACTGGCTTCTACCTCTTAAAGTGGACTAGTCTTCTCATCCCGCCAACTACTCTCGTAATCTTGAATGTTGTGGGAATTGTGGCTGGAATCTCAGATGCCGTCAACAATGGCTATGACTCATGGGGACCGTTATTTGGTAAACTATTTTTAGCCTTCTGGGTTATTGTGCACTTGCATCCTTTCCTCAAAGGTCTGATGGGAAAGCAAAACAGGACTCCTACCATCGTTGTCCTTTGGTCATTAATTGTAGCTTTAGTTTTGTCATTGCTTTGGGTCCGGATCGACCCATTTTTTCCCAAGCAAACTGGTCCAGTACTCAAACAGTGTGGGGTAGAATGTTAG	2721	0.4425	MSPPASHKLLRFTHLQANADSNPHELLAHSQASSASSAPTVAGKDSDGKIVGCKYGQKDEQGEDDDSLSRQPLWRKVPVPSNLINPYRIVIVLRLVVLAFFFRFRISNPVHDAYSLWLISVICEVWFALSWIIDQLPKWFPITRETYLDRLSIRFEHKEPNRLAPIDVFVTTVDPLTEPPIVTANTVLSILSVDYPVEKVTCYVSDDAASLLLFNTLSETAEFARTWVPFCKKYDIEPRAPEFYFSQKVDYFKDKVHPAFVKKRRAIKREYEEFKVKINALVAKAQKRPEDGWVMQNGMPWPGNNAHDHPGICQVSLGGAGTLDVEGKELPRLVYVSRENRPGYQYHKKAGALNALVRVSAVLTNAPFLLNMDCDHYINNSKAIREAMCFLMDPHGRGLCFVQFPLSFDGMDSRDGYANHNALFFNINMKSLDGIQGPEYFGTGCVFNRRALYGYDPQIVKRGSKINCDWWPLWCCCCCSGSDSEFDLEEMDENLEEYDELEIFDLEDMEESLESSDVEEILEILDLDQSEEEHEGYEEPEEPSLMLQENFVKRFGQSPIFIASTLSGAGGVSKGANAMKEAIHVMCCDYEEKTEWGKEIGWIYGSVTEGILTGFKMHCRGWKSAYSIPKRAAFKGFAPVNLSDQLCEILRRALGSVEIVFSRHCPMWYGFKGKLKWLQRLAYTNTIVYPITSIPLLIYCTIPAICLLTGKFILPTLTNLDSIWLMALFISIILTCVLELRWSGVSMQDWWRHEQLWIIGGVSSHLFAVFQGLLKVVTGADTDFVVRPKTTSHTGFYLLKWTSLLIPPTTLVILNVVGIVAGISDAVNNGYDSWGPLFGKLFLAFWVIVHLHPFLKGLMGKQNRTPTIVVLWSLIVALVLSLLWVRIDPFFPKQTGPVLKQCGVEC	906

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele14g1834	906	MobiDBLite	consensus disorder prediction	51	69	-	-
	Lele14g1834	906	MobiDBLite	consensus disorder prediction	26	41	-	-
	Lele14g1834	906	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	332	460	IPR029044	-
	Lele14g1834	906	PANTHER	X-BOX TRANSCRIPTION FACTOR-RELATED	71	870	-	-
	Lele14g1834	906	MobiDBLite	consensus disorder prediction	26	69	-	-
	Lele14g1834	906	Coils	Coil	264	284	-	-
	Lele14g1834	906	Pfam	Cellulose synthase	166	899	IPR005150	GO:0016020\|GO:0016760\|GO:0030244
	Lele14g1834	906	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	321	467	IPR029044	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele14g1834	Lele-ChrLele14	25074027	25078937	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele14g1834	54	906	Cell Wall Biosynthesis	AT5G17420	62.788	0.0	1130