Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1833 ATGGGTATGTCTAGACCATTGCCGTCATCCTTGTCAGTCCTTCCAACTCCGATAGGAGAGACCTTTGCCAATTTTTCTGATTCTCAGCCGGCTGTCATGGCCAAAGAGCTTATGACTGGGCCTATAACTCAGCCAGGTCATTTAAATTCCAATGGAGCAGTTGGACACATGTTTTCATCTTCCCCCGGATATTCAACTGATCTCCACCACTCATCTCTTTTGCCTCATGAAAAACAATCAATAAGTGCTCATTTCATTTCACAGTCATCCAGTAACATGGCTTCATTGCCATTTTCTTATTCTTCCAATAGTGGACCACTTCCTTCTTCAACACCAAATAATTATTTCAAAGAAAACAGTGCTTCCTGGAATATAGAACCCCTGCCCAACTTTCTTGATTTCCCTGTAAATACTACCATTGAGAATAGTCAAGCAGAAAACAGTGCCTGCACTGTCATGGCATCCGAGGAGTATGGTAAGCAAAATGAATGGCAAGAGTGGGCTGACCAGCTTATAAATGAAGATGACCCTTTGACTTCTAATTGGAATGACCTTCTTACTGGCAACGTTCAAGATCTTGAACCAAAGGTTAAGGTGGGGTTCCAGGTTTCACATGTTCCAGAAAACCAGTCCCAAGGTCAGCAGCTACTTCCTGCTTCATCTGGAGACAACCGCTTTGGTGCTCCCCCAGCTTCCTCGGCAAGTTCTGCTCCTGGCAAGCCACGGATGCGTTGGACACCAGAGCTTCATGAGGCCTTTGTGGATGCTGTCAACAAACTTGGTGGCAGTGAAAGAGCTACTCCTAAGGGTGTACTGAAGCTCATGAAAGTTGAAGGATTAACAATATATCATGTTAAAAGTCACTTGCAGAAATACAGGACTGCTAGATATAGACCGGAACCATCTGAAGGATCCTCGGAGAAACGACTAACTTCCATTGAAGATATGCCGCCTCTAGACTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAGCAACTTGAGATTCAACGAAACCTACAACTGCGAATAGAAGAACAAGGAAGGTACCTTCAGATGATGTTTGAGAAGCAATGCAAATCTGGAGTGTCTTCAGATGCTATCAAAGATTGTCCTGCCCAAGGTGAAGTGGAGGGCGATTGCAAGTTGGAACGTGATCAAGCTAATAGCAGTATTGCAGTTGAGGAAAGCTCTATGAAGAATGATGGTCCTGAAAATCAAGCTCCTGAGAATCCTAAGCAACAAACCAGTGAAGAGAGTCATCCAGCCTCAAAGAGGCAGAGAACAGAGGAGTAA 1329 0.4454 MGMSRPLPSSLSVLPTPIGETFANFSDSQPAVMAKELMTGPITQPGHLNSNGAVGHMFSSSPGYSTDLHHSSLLPHEKQSISAHFISQSSSNMASLPFSYSSNSGPLPSSTPNNYFKENSASWNIEPLPNFLDFPVNTTIENSQAENSACTVMASEEYGKQNEWQEWADQLINEDDPLTSNWNDLLTGNVQDLEPKVKVGFQVSHVPENQSQGQQLLPASSGDNRFGAPPASSASSAPGKPRMRWTPELHEAFVDAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGSSEKRLTSIEDMPPLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVSSDAIKDCPAQGEVEGDCKLERDQANSSIAVEESSMKNDGPENQAPENPKQQTSEESHPASKRQRTEE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1833 442 MobiDBLite consensus disorder prediction 208 231 - -
Lele14g1833 442 MobiDBLite consensus disorder prediction 401 429 - -
Lele14g1833 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 237 297 IPR017930 -
Lele14g1833 442 Coils Coil 328 348 - -
Lele14g1833 442 Pfam MYB-CC type transfactor, LHEQLE motif 325 372 IPR025756 -
Lele14g1833 442 MobiDBLite consensus disorder prediction 382 442 - -
Lele14g1833 442 Pfam Myb-like DNA-binding domain 242 293 IPR001005 -
Lele14g1833 442 SUPERFAMILY Homeodomain-like 238 294 IPR009057 -
Lele14g1833 442 FunFam Myb family transcription factor 239 297 - -
Lele14g1833 442 MobiDBLite consensus disorder prediction 208 243 - -
Lele14g1833 442 Gene3D - 239 298 - -
Lele14g1833 442 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 240 294 IPR006447 GO:0003677
Lele14g1833 442 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 214 429 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1833 Lele-ChrLele14 25068165 25071046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1833 15 424 G2-like Transcription Factor Family AT4G28610 47.991 6.45e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele14g1833 Myb_DNA-binding 7.6e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1343 05 8432276 8438837 Lele14g1833 14 25068165 25071046 CCT
Lele13g2363 13 29343130 29352612 Lele14g1833 14 25068165 25071046 CCT
Lele15g0056 15 331728 341994 Lele14g1833 14 25068165 25071046 CCT
Lele16g0058 16 369675 373629 Lele14g1833 14 25068165 25071046 CCT
Lele14g1833 14 25068165 25071046 Lele15g0513 15 2998325 3001155 hybridization
Lele14g1833 14 25068165 25071046 Lele16g0533 16 2950334 2953194 hybridization