Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1831 ATGTCGAAGAGAGGTCGCGGTGGTTCAGCCGGAAACAAGTTCCGGATGTCACTGGGTCTACCGGTGGCGGCGACAGTGAACTGCGCCGATAACACTGGAGCGAAAAATCTGTACATCATTTCAGTGAAGGGGATCAAGGGTCGCCTTAACCGTTTGCCGTCTGCTTGCGTTGGGGACATGGTAATGGCAACCGTGAAGAAAGGGAAGCCCGATCTCCGGAAGAAGGTCCTGCCCGCCGTGATCGTACGCCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTTTACATGTATTTCGAAGATAATGCTGGGGTCATTGTGAATCCCAAGGGAGAAATGAAAGGTTCTGCTATCACTGGTCCAATCGGTAAGGAGTGTGCTGATTTGTGGCCTAGGATTGCAAGTGCAGCCAACGCAATTGTTTGA 423 0.5272 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1831 140 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele14g1831 140 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele14g1831 140 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 139 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele14g1831 140 Pfam Ribosomal protein L14p/L23e 22 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele14g1831 140 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
Lele14g1831 140 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele14g1831 140 FunFam 60S ribosomal protein L23 1 140 - -
Lele14g1831 140 SUPERFAMILY Ribosomal protein L14 11 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1831 Lele-ChrLele14 25060317 25061783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1831 1 140 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 97.857 7.48e-99 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1341 05 8417894 8425835 Lele14g1831 14 25060317 25061783 CCT
Lele14g1831 14 25060317 25061783 Lele14g1831 14 25060317 25061783 ECH
Lele14g1831 14 25060317 25061783 Lele15g0515 15 3008814 3011549 hybridization
Lele14g1831 14 25060317 25061783 Lele16g0535 16 2964221 2965786 hybridization