Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1827 ATGAATTGGGTGAAACTGGAGCGCAAGGAGGAGAAATATCTGTGGAGTACAAAGAAGGCTAAACGTCTAGAAGGAGGAGGAAAGGACAATGTTTTAGGCTACATTGATGGAGGGGCACAAAGTAGACATGGCGATTCTTCTCCCAATTCGATGCTCACGGAGTCTAAAGACGATAATTTAGCCCTTTCTTCTGAGGACTCGTCTTGCCCTCATGAGTCCGAGCTTGAATTGGGTCTTTGCTTAAGGCTTTATCATCCTCCGGGCAAGTCTCAGCCACCTCCGACGACTCAGTATGCGAGAATTTTAACGGCTATGGACTTTTCTTCATCCTCCTCGTACTCTGCTTCCTCTTCCTCTCCTAACTCGACAGCTGGCACCAAGAGGGCTGCTGATTCTCTTGTCCCTGCAAACGGTCCTAGTCAAGTTGTTGGATGGCCTCCCCTTCGAGCATATAGAATGAACAGCTTTAATAATAATCACTCAAAATCTCCAGCCACTGAAGCTAAGAGTAATCAAACGGCTGCAAGGAAGATTACTGACAATGGCAGTAATAAAAACAATAGTACTGCCAAAGAGAAAACACACATCTGGAGATCCCTATTTGTGAAGGTAAATATGGATGGGACACCAATTGGAAGGAAGGCTGATTTGAGTACTCATAGTTCCTATGAAACCTTGGCACATACTTTGGAGGATATGTTTAATGAACCAACTCCTGTTGTCACCAAAGGATTAAATGGGGAGGATCGTGGTATTGTCATTGGAGCGAAAAAGAGACACTTAAACTTGCTGGATGAATCTTCCAATTTTGTGCTAACTTATGAAGACAAAGAAGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGGACATGTTTCTTAATTCTGTGAGGAGGCTTAGAATTATGAGGACGTCCGAGGCAAATGGACTTGCGCCAAGATTGGAGGAGAAGAAGAGCAGACTGAGAAATTAG 972 0.4424 MNWVKLERKEEKYLWSTKKAKRLEGGGKDNVLGYIDGGAQSRHGDSSPNSMLTESKDDNLALSSEDSSCPHESELELGLCLRLYHPPGKSQPPPTTQYARILTAMDFSSSSSYSASSSSPNSTAGTKRAADSLVPANGPSQVVGWPPLRAYRMNSFNNNHSKSPATEAKSNQTAARKITDNGSNKNNSTAKEKTHIWRSLFVKVNMDGTPIGRKADLSTHSSYETLAHTLEDMFNEPTPVVTKGLNGEDRGIVIGAKKRHLNLLDESSNFVLTYEDKEGDWMLVGDVPWDMFLNSVRRLRIMRTSEANGLAPRLEEKKSRLRN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1827 323 SUPERFAMILY CAD & PB1 domains 197 302 - -
Lele14g1827 323 MobiDBLite consensus disorder prediction 42 68 - -
Lele14g1827 323 ProSiteProfiles PB1 domain profile. 199 306 IPR000270 GO:0005515
Lele14g1827 323 MobiDBLite consensus disorder prediction 110 128 - -
Lele14g1827 323 FunFam Auxin-responsive protein 194 314 - -
Lele14g1827 323 Gene3D - 195 316 - -
Lele14g1827 323 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 73 309 IPR003311 GO:0005634|GO:0006355
Lele14g1827 323 MobiDBLite consensus disorder prediction 24 69 - -
Lele14g1827 323 MobiDBLite consensus disorder prediction 157 191 - -
Lele14g1827 323 MobiDBLite consensus disorder prediction 110 141 - -
Lele14g1827 323 Pfam AUX/IAA family 107 313 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1827 Lele-ChrLele14 25037839 25040917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1827 203 313 B3 DNA Binding Superfamily AT1G59750 32.432 7.48e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele14g1827 AUX_IAA 7.8e-61 CL0072