Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1821 ATGAAGGTGTACTCGTCGTACATGGCCGCGGCATACGAAGGCCTATTGATTCCGCTCATAATCATCGCTCAAGCACTATTTCGGTTCCTTCAGATTGCCAGCAATTGGTGGATGACTTGGGCAAATCCTCAGACCGCAGGAGAACAAACCAAAACAACTCCTATGATTCTTCTCCTTCTTTACATGGCACTTGCTTTTGGAAGCTCTTGGTTTATATTTATCAGGGCTGTTCTAATAGCTACATTTGATCTAGCAGATTCACAAAAGCTTTGTTGGAATATGCTTAGAAGTATTTTCCGTTCACCGATGTCATTCTTTGACTCTACTCCAGCTGGAAGGATTTTTAATCGTGCATTTTTTTTTCCTGTTTTTGGTTTATCTCTCCTTACTGGGTGGATTTGCTTCAACAACAATCCAGCTTATTGGTATTGTTGGTGTGATGACAAAAGTTACCTGGCAAATTTTGCTTCTAATCATTCCTATGGCTGCTTCTTGTTTGTGGATGCAGAAATACTATATGACTTCCTCAAGGGAACTGGTTGTCTTGCAGCTATTGAGTGGCTCTGCTTGCGCATGGAATTACTTTCAACCTTTGTGTTTGCTGTCTGCATGATATTAATTGTGAGATTTCCACGTGGAACTATTGACCCTAGCATGGCTGTACTTGCTGTGAAATATGGCCTGAATTTAAATGCACGCTTATCAAAGTGGATACTTAGCTTTTGCAAACTTGAAAATAAAATAATATCTATTGAAAGAATATACCAATACAGCCACATTCTTAGTGAAGCACCAACAAGTATTGAAGAATTTCGTTCTCCATCCACAAGGCCTGAGAACGGGACAATTGAAATTTTTTATTTAAAGGTTCGTTACAAGGAGAATATGCCCCTGGTGCTTGAAGGAGTATCTTGCACATTTCCTGGTGGAAAGAAAATTGGAATAGTTGGACTAACTGGCAGTGGAAAATCTACTTTGATTCAGGCATTATTCCGATTGATTGAACCTGCAGGTGGAAGTATCTTCATAGACAACATTAATATTTCAGACATTGGCCTTCATGACCTTCGTAGCCGTCTCAGTATCATACTACAAGATCCAACTCTATTTGAAGGTACCATCAGAGGAAATCTTTATCCTCTTGAAGAGCACTCAGATAATGAGATTTGGGAGATAAGTCTCAGCTTGGAGAAGTCATCCGTGAAAAGGAGCAAAAACTTGATACACCAAGTAGGCAACCCAAGTAAAATTGCAGAGTTGGATACCCCAACTCAACTATTAGAGGATAAATCGTCCATGTTTCTAAAGTTGGTGGCTGAGCATTCATCACGCTCAAGTGGCATTCCAGATTTTTGA 1356 0.3997 MKVYSSYMAAAYEGLLIPLIIIAQALFRFLQIASNWWMTWANPQTAGEQTKTTPMILLLLYMALAFGSSWFIFIRAVLIATFDLADSQKLCWNMLRSIFRSPMSFFDSTPAGRIFNRAFFFPVFGLSLLTGWICFNNNPAYWYCWCDDKSYLANFASNHSYGCFLFVDAEILYDFLKGTGCLAAIEWLCLRMELLSTFVFAVCMILIVRFPRGTIDPSMAVLAVKYGLNLNARLSKWILSFCKLENKIISIERIYQYSHILSEAPTSIEEFRSPSTRPENGTIEIFYLKVRYKENMPLVLEGVSCTFPGGKKIGIVGLTGSGKSTLIQALFRLIEPAGGSIFIDNINISDIGLHDLRSRLSIILQDPTLFEGTIRGNLYPLEEHSDNEIWEISLSLEKSSVKRSKNLIHQVGNPSKIAELDTPTQLLEDKSSMFLKLVAEHSSRSSGIPDF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1821 451 Gene3D ABC transporter type 1, transmembrane domain 8 121 IPR036640 GO:0005524|GO:0016020
Lele14g1821 451 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 119 - -
Lele14g1821 451 Pfam ABC transporter 300 400 IPR003439 GO:0005524
Lele14g1821 451 Gene3D ABC transporter type 1, transmembrane domain 179 266 IPR036640 GO:0005524|GO:0016020
Lele14g1821 451 Gene3D - 267 416 IPR027417 -
Lele14g1821 451 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 117 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele14g1821 451 SUPERFAMILY ABC transporter transmembrane region 16 129 IPR036640 GO:0005524|GO:0016020
Lele14g1821 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 277 392 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1821 Lele-ChrLele14 25018725 25021036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1821 299 444 Calmodulin-binding Proteins AT2G36910 28.070 3.72e-10 60.5