Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1818 ATGGTAGGACTGGGGTCGTCAAATTGTCAATCTTCTTTAATTTCACTGGAGCTGTGCTTGTTCAAGAATTTTTCAGCACCAACTGTTGAATTAAATTTCGAGATATTGAATTATGGGTTTATTTATGCACAGGAAACGATGTCTTTTAATGATGTCACCCTTCTATTCACTTTTCAGGAAAAGGGCAATGAATATGTCAAAATAGGTAAAGAGCATTATTCTGATGCTATTGACTGTTACACAAGGGCAATAGATCAGAAAGTCTTAAGCGACTCAGAGAACTCAGTTCTTTTGGCAAATAGAGCACATGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCCGAAGCTCAATCTCATTGTCAAAACGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCCAACAGATTGATCTAAAGAAAGCAGAACAGGAAAAACATGAAGCTGAAGTCTCCAAAGCTGTTACAGAGGCAAAGCTAATAGCTATGGAGCTATGGTTATCGTTCTCGCAACAGCCTCCACAAAACCTCCACATGATTCAATCATTCAATATAGCTTTGTCAGATGATTCAGCTTCAGAATAA 609 0.3793 MVGLGSSNCQSSLISLELCLFKNFSAPTVELNFEILNYGFIYAQETMSFNDVTLLFTFQEKGNEYVKIGKEHYSDAIDCYTRAIDQKVLSDSENSVLLANRAHAIYRAAKASLSLNLLAEAQSHCQNGLQLDPNNEELKKLGQQIDLKKAEQEKHEAEVSKAVTEAKLIAMELWLSFSQQPPQNLHMIQSFNIALSDDSASE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1818 202 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 56 104 - -
Lele14g1818 202 SUPERFAMILY TPR-like 58 144 IPR011990 GO:0005515
Lele14g1818 202 Gene3D Tetratricopeptide repeat domain 56 172 IPR011990 GO:0005515
Lele14g1818 202 Coils Coil 138 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1818 Lele-ChrLele14 24989906 24991096 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1818 14 24989906 24991096 Lele07g1373 07 8348832 8352681 CCT
Lele14g1818 14 24989906 24991096 Lele08g1175 08 7395184 7402512 CCT
Lele14g1818 14 24989906 24991096 Lele15g0528 15 3088651 3089759 hybridization