Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1795 ATGCTGTGCATCAATGTTAAACATCACTTTTCTAGTAGCTACCACGTTGGAATTCCTAGAGGGTTTTATTCTTTGATGGGAGGCGGTGCAGTTTGCATCGAATTACCCGCGGATAGAACAGATGAAAACGATGAGATATCCAGAACGGACCTGAAGAGGGACTGCCAATGTCTTACTGATACTGAAGTTGACGCCTCCCCGAATAAGAAACAAGCAAAAGAAATCTCAAACGATGACGTGCGCTCTGAAGTTTCTAATCCCAATATGTCTTCGAAAGAGAATGTATTAGCATTTCAAGATATTAGTAGCCAGCCCAGCGAGTTGGCAAATACTAATCAAGCAGAGTGTGGAGAAGTAACGTCCACTTGTTTGGAGAATTCAAGTTCGGATGAGACCTCGAGTGATGGAGGGGGTGATCATAATACCATTTCTCAGAACGATAAGCGCGTGAGCAGTGCTGAAATGACGTCCTGTGTTGTTCTGGAAATTCCCAAGCATGCTAGTTCATCTGGAATCAGAAAGATTACGTTTAGGTTCAGTAAAAAGAAGGAGGACTATGATTATCAGTCACTTGCCAGTACTAATAGGAATCCTTACCACGAAGAACCAAGTTCTGATTATAAGTCGGGGATGTTAGAAAGTTCGTGCGGGATGAAAGATGTTCAAGCTGGTGATTTTAACTTGTATGCTCGAAATATGGAGTTGAAAATGTCAAAGAAGATTTTAAAACAAAAGAGAGAAAAGAAAAGAAAGTTCTCGTGTGAGGTAGTTTTCTTACATCCTGAAGTTGTTGTCAGATTGAGCTTCCTGGGATTATTCAGGGTGGTGGATATATGTGTGGCTGCTCGTTGTGCAGCTTCTCCGGGTGCGTATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGGCATCCAAATAATCACATATTCCTGGAAAACGGAAAGCCAATTTATAGTATTATACAGGAGATTAAAACTGCTCCACTCAGCTTATTAGATGAGGTTGTAAAGAACGTTGCTGGTTCATCTGTCAATGAAGAGTCCTTCCAGGTTTGGAAAGCAAGTCTCTTGCAAAGCAATGGGCAGGTTGAGGCAGAAAAGAATTTTAACTCCAAGCTTGTTGGCATGCCTCGTACAAACGTAAGATCAAGCTCTCATACTTCTAACTCAGGTCTACAGCAAAAGAAAAATGCAGATGGGTGCAATAAGAGAAGGGATAATGATTTGCATAGGCTACTTTTTATGCCAAATGGATTACCAGATGGTGCTGAATTGGCTTACTATGTCAAAGGACAGAAACTACTTGGAGGTTACAAACAGGGAAATGGTATAGTTTGTGGTTGTTGTGATCGAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCTGGCATGGCTGCCCGGCGTCAACCTTATCGTCATATATATACTTCCAACGGATTAACTCTCCATGATATAGCCCTCTCATTAGCAAATGGTCAAAACCTTACCACGGGAGATAGTGATGATATGTGTGCAGTATGCGGAGATGGAGGGGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATGCAGTTTGCTTAGGTTTACAGTGTGCTCCTGAAAGCTGTTGGCTTTGTCAAACTTGTAGAGATATTTCTGGCTGCAGCAGATTATCTTCTACAGCGAGGCCAATTAAGATAAGGTTGACCCGGGTTGTTAAAGCGCCAGAATTTGAGATGGGTGGTTGTGTTGTTTGTAGGGAGCATGATTTTAGTGTCGCTAAATTTGACGAGCGAACGGTAATAATTTGTGACCAGGAATTGCCTAAGGACAAGTGGTTTTGTTGTGATGACTGCAATCGAATATATGGAGCCCTACAAAATTCAGTTTCTGCTGGAGCAGAGATTATACCAGCTTCCTTGTCAACCCTAATAAATAGGAAGCGTGAGGAGAGGGGCTTACCTATTGATGGAGGAGGCATTGATGATATCCAATGGCGAATTCTAAGCGGAAAAAGTCGTTATCCAGAACATTTACCATTACTTTCACGGGCTGCTGCAATTTTTCGAGAGCGGTTTGATCCCATTGTTGCAGTCTCTGGTCGTGACTTGATTCCTGTTATGGTATTGGTTGATGTAATAAATTGGAGAAATATTTCTGGTCAAGAGTTTGGGGGGATGTATTGTGTTGTCTTGATAGTGAAATCTGTTGTTGTATCTGCTGGACTACTTAGGATTTTTGGACGTCATGTTGCTGAGCTTCCAATGGTTGCTACAAGTAGAGAACATCAAGGAAAAGGTTATTTTCTAGTGTTATTCTCTTGCATAGAGAAGTTGCTGTTGTCCCTGAAGGTGGAAAAGCTGGTGCTTCCTGCAGCAGAGGATGCGGAATCGATTTGGACTAGAAAATTAGGCTTCCGAAAGCTGACTGAAGACCAGGTTAGATTAATTCTGCATTTACAGGCTGTGAGAAGTAGATATCGACATCTGATTTCTGAAGAATGTGATGAATTTGAGTCATTGGTGTAG 2508 0.4207 MLCINVKHHFSSSYHVGIPRGFYSLMGGGAVCIELPADRTDENDEISRTDLKRDCQCLTDTEVDASPNKKQAKEISNDDVRSEVSNPNMSSKENVLAFQDISSQPSELANTNQAECGEVTSTCLENSSSDETSSDGGGDHNTISQNDKRVSSAEMTSCVVLEIPKHASSSGIRKITFRFSKKKEDYDYQSLASTNRNPYHEEPSSDYKSGMLESSCGMKDVQAGDFNLYARNMELKMSKKILKQKREKKRKFSCEVVFLHPEVVVRLSFLGLFRVVDICVAARCAASPGAYEFEQHAGAKTRHPNNHIFLENGKPIYSIIQEIKTAPLSLLDEVVKNVAGSSVNEESFQVWKASLLQSNGQVEAEKNFNSKLVGMPRTNVRSSSHTSNSGLQQKKNADGCNKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAVCLGLQCAPESCWLCQTCRDISGCSRLSSTARPIKIRLTRVVKAPEFEMGGCVVCREHDFSVAKFDERTVIICDQELPKDKWFCCDDCNRIYGALQNSVSAGAEIIPASLSTLINRKREERGLPIDGGGIDDIQWRILSGKSRYPEHLPLLSRAAAIFRERFDPIVAVSGRDLIPVMVLVDVINWRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGRHVAELPMVATSREHQGKGYFLVLFSCIEKLLLSLKVEKLVLPAAEDAESIWTRKLGFRKLTEDQVRLILHLQAVRSRYRHLISEECDEFESLV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1795 835 MobiDBLite consensus disorder prediction 122 149 - -
Lele14g1795 835 SUPERFAMILY FYVE/PHD zinc finger 488 543 IPR011011 -
Lele14g1795 835 MobiDBLite consensus disorder prediction 374 402 - -
Lele14g1795 835 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 490 587 IPR013083 -
Lele14g1795 835 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 703 804 IPR016181 -
Lele14g1795 835 Pfam Tify domain binding domain 436 485 IPR032308 -
Lele14g1795 835 Pfam Tify domain binding domain 290 322 IPR032308 -
Lele14g1795 835 PANTHER AUTOIMMUNE REGULATOR 43 807 - -
Lele14g1795 835 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 490 568 - -
Lele14g1795 835 ProSitePatterns Zinc finger PHD-type signature. 503 542 IPR019786 -
Lele14g1795 835 MobiDBLite consensus disorder prediction 66 80 - -
Lele14g1795 835 ProSiteProfiles Zinc finger PHD-type profile. 500 545 IPR019787 -
Lele14g1795 835 MobiDBLite consensus disorder prediction 66 90 - -
Lele14g1795 835 SMART PHD_3 502 543 IPR001965 -
Lele14g1795 835 MobiDBLite consensus disorder prediction 374 396 - -
Lele14g1795 835 Gene3D - 710 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1795 Lele-ChrLele14 24819243 24829638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1795 26 808 PHD Transcription Factor Family AT3G53680 47.614 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1795 14 24819243 24829638 Lele15g0557 15 3280602 3288019 hybridization
Lele14g1795 14 24819243 24829638 Lele16g0570 16 3209443 3218900 hybridization