Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1763 ATGCCCATATCCACCTCCATTCGACAGAGAGACCTGAACGCCGTTCTCCTCCTCCTCTTTTTCTGCGAAACCCACCAACACAACCCCACAGTCCTCGAGGAGAATTATTCGGATTGGCGGCTCACCTTATGTAATCTTTTCTCTGATAAGCTGTTGACAACTGCTTATTCTCCAGTAGGGACGAATGCTTGGACGGCCCTTGCTCCTTACGTTGACATGGTGAGTCGGAGCTGGAGACTTGGGAGGGTAAGTTGCGGCGGCGGGAAGAAGGGGGCGTCGCCGGATACGGTGGTAGGACTTCCAGCGGTGGAAGTGAAGGAGGGCGGACGGGAGTGCGTAATATGTAAAGAGGAGATGGAAGTAGGGAGGGATGTGTGTGAGTTACCATGCGAGCATCTGTTTCATTGGAGGTGTTTATTGCCGTGGCTGAAGAACAATGACACGTGTCCTTGCTGCCGGTACCGGTTGCCGCCCGATGATGTCTTTGGGGAAATCCAACGGCTCTGGGATATGCTAATTAAATTGAGTGCACGGCAAAGCCCGGTTCAGTCATAA 555 0.5279 MPISTSIRQRDLNAVLLLLFFCETHQHNPTVLEENYSDWRLTLCNLFSDKLLTTAYSPVGTNAWTALAPYVDMVSRSWRLGRVSCGGGKKGASPDTVVGLPAVEVKEGGRECVICKEEMEVGRDVCELPCEHLFHWRCLLPWLKNNDTCPCCRYRLPPDDVFGEIQRLWDMLIKLSARQSPVQS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1763 184 Pfam Ring finger domain 111 153 IPR001841 -
Lele14g1763 184 ProSiteProfiles Zinc finger RING-type profile. 112 153 IPR001841 -
Lele14g1763 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 159 IPR013083 -
Lele14g1763 184 SMART ring_2 112 152 IPR001841 -
Lele14g1763 184 SUPERFAMILY RING/U-box 106 159 - -
Lele14g1763 184 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 78 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1763 Lele-ChrLele14 24668418 24668972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1763 4 176 C3H Transcription Factor Family AT5G02750 42.051 2.49e-48 157