Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1755 ATGACAAGGGACGTCCTCATGAGCATTGATGGTGATGATAAAGAATTTCAAGAATTGGCTCAGCGACTACGAGATGGTAAAAAAACCACCAAGGAGGAAGTTGCCGGTGAAGAACATAGTTTCCGTGAGGATGATGAGTTAAAAAGTAATGGAACAGCTGAAGAAGTTAAAGTGGGACAAGATAGGATTGTGGAAGCCCCAGCCGTTCAGCATATGCCTCAACAACAGCCTCAAGGGGCAATTTGGGAGAGATTCCTACATCTCAGATCCCTCAAGGTCTTGCTCGTGGAGATTGATGACTCTACACGTCATGTTGTTGCAGCACTGCTCCGGAACTGTAGTTATGAAGTTATTGAAGCAGCAAACGGATTGCAAGCATGGAAGATCTTGGAAGATCTAACCAATCAAGTAGATATTGTTTTGACGGAGGTAGCGATGCCTTGCTTATCAGGCATTGGCCTTCTGTCCAAAATTATGGCCCACAAAACGCGGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGTAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAATCAAAGAGTTTTGAGAAATCTGATAACAACAGAGGCAGCAATGATGAGGAAGACAATGGTAGTGTAGGTCTAAATAACGGGGATGGAAGTGACAATGGTAGTGGTACTCAGAGCTCATGGACTAAACAAGCTGTAGAAGTTGACAGTCCCAAACCATCCCAATGGGACCATATAGCTGAGTGTCCTGACAGCACCTGTGCTCAAGTTGTTATCTCAAATGCCGAAATTAGTGGAAACAAGGTGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCAGCTTGAGCTGAAAGTGGATTCAAGTAGGGATCTTGGCTTGATTCTCGACTATAGAAATGAGGTTTTAGCCAATAATTTGGGCGAAAAACATAGCAACCCACTTGATATAGGTTCCTCTAAATTCAATGAGCAACTTATTAGAGGACAGCTTGGACATCACTGTGAAGATCCTTCTAGCAAGTTAAGATGCAAAGGTCCATTTCAGTCTGATGCTGCTGCGAGTACATATGATTTGCGGATTCATGGTGGAGAATTTGAAGCCTCAAATATAAGAGCCAAGCCCTCAGATACTGAAAGCAAAGCTATTAATAATAATGAAGAATTGCCGTCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGGGTTAAAGATGCGGGGATTACAATTCAGGATGAGCGTAATGTTTTAAGACGATCAGACCTTTCAGCCTTTTCAAGGTACAATGCGGCTTCTAATGCTAAGAAATCTCCTGGTGGTTGTGCTGGAAGCAATTCTCCCCATAATAATAGCTTAGAAGTTACAAAGAAAGAGTCATCACGTGACATCCAATCCCATTCTAGCGGAAATCCCCTTAACCAGAGCTCAAATGGCGCCAGCAATAACATTGACATGGGCTCCACGACTGATAACGCTTTCACTAAATCTGGTGTTATGAGCAAGACAACTGTGGCGTCACCAAGTAAATGTTTGTATCAATCTTCTGCCTTCCTCCCTATAAAAAACAACTTCATGTGTACCTCTCAACAAGTTGCAGTACATAATACTGAAGATATGACAGCCTCAACTATGCTAGAACCACCTAGAGGTATACACAAGGACTCTCCAACACAGGACTTCCACTGCATGTACAACAACCATAGCTGCATCGTTAACAACATGCAGCATCAGCTACCCCCGGACCATGATGATGCATCATCAAAGAAAATTGCAGCCACAGCCCCACACTGTGGGTCATCAAATATAGTTGAAATGGGTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGTGTGTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGTCAATGCTAGAGGGGAAAACATAGAAAATAACAATGGAATTGCTGAGAATAGTCGAGGTGGTGATGCTAGTGGGAGCGGAAGTGGGAGTGCGAGTGCTAACAGAATAGATCAGAAGATTTCTCAAAGAGAAGCAGCCTTAACTAAATTTCGGCAGAAGAGAAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCTGAAGAACGACCTCGCTTTCGTGGACAATTTGTTCGACAGGCCTCCAATAAGAGTACAAGTGAGGCAGAAGAGGCAACTGACAGCTGA 2343 0.4289 MTRDVLMSIDGDDKEFQELAQRLRDGKKTTKEEVAGEEHSFREDDELKSNGTAEEVKVGQDRIVEAPAVQHMPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLRNCSYEVIEAANGLQAWKILEDLTNQVDIVLTEVAMPCLSGIGLLSKIMAHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSFEKSDNNRGSNDEEDNGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPSQWDHIAECPDSTCAQVVISNAEISGNKVFSVAIKECPDQKDQLELKVDSSRDLGLILDYRNEVLANNLGEKHSNPLDIGSSKFNEQLIRGQLGHHCEDPSSKLRCKGPFQSDAAASTYDLRIHGGEFEASNIRAKPSDTESKAINNNEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSNSPHNNSLEVTKKESSRDIQSHSSGNPLNQSSNGASNNIDMGSTTDNAFTKSGVMSKTTVASPSKCLYQSSAFLPIKNNFMCTSQQVAVHNTEDMTASTMLEPPRGIHKDSPTQDFHCMYNNHSCIVNNMQHQLPPDHDDASSKKIAATAPHCGSSNIVEMGEGNVGNYSINRSVSGSNNGSNGQNGSSTAVNARGENIENNNGIAENSRGGDASGSGSGSASANRIDQKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEERPRFRGQFVRQASNKSTSEAEEATDS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1755 780 MobiDBLite consensus disorder prediction 659 734 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 478 533 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 233 247 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 747 780 - -
Lele14g1755 780 SMART REC_2 91 206 IPR001789 GO:0000160
Lele14g1755 780 MobiDBLite consensus disorder prediction 22 51 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 659 721 - -
Lele14g1755 780 ProSiteProfiles CCT domain profile. 723 765 IPR010402 GO:0005515
Lele14g1755 780 CDD psREC_PRR 93 196 - -
Lele14g1755 780 FunFam Two-component response regulator-like PRR37 91 249 - -
Lele14g1755 780 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Lele14g1755 780 Pfam CCT motif 723 765 IPR010402 GO:0005515
Lele14g1755 780 MobiDBLite consensus disorder prediction 509 533 - -
Lele14g1755 780 SUPERFAMILY CheY-like 89 215 IPR011006 -
Lele14g1755 780 MobiDBLite consensus disorder prediction 248 280 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 215 288 - -
Lele14g1755 780 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 275 IPR045279 GO:0009736
Lele14g1755 780 Gene3D - 90 244 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 478 498 - -
Lele14g1755 780 MobiDBLite consensus disorder prediction 215 232 - -
Lele14g1755 780 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1755 Lele-ChrLele14 24612650 24619944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1755 167 767 Response Regulator Gene Family AT5G02810 47.030 8.42e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele14g1755 Response_reg 3.5e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1755 14 24612650 24619944 Lele15g0595 15 3500210 3508385 hybridization
Lele14g1755 14 24612650 24619944 Lele16g0610 16 3427459 3434810 hybridization