Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1753 ATGGTCCTAATCCAGCACGCGTGCGGCCGAGGATACGGAAGCAGAGCCTCCCTCCCAAGTTCGCCGCAAGCGTCGTCTCTCAAGGCTCCTGTGGTTTCAATGGCGGGCATAGCTCGCCTGCTAAGAAGTACAACATCCATCTCTCACCTGGCGGGTAAATCCTTTTCCTCCGTGGCTGCATCTCAGGCGTCTCCGTACAATGTCCCTCTCTTCCATCTCAAACCCCAGTTTCCTCGTAAAGATCCACGAGATAGAAATGTCCAGTGGATCTTTTTGGGCTGCCCAGGTGTCGGTAAAGGCACATACGCTAGTCGCCTCTGCAATCTCCTAGGCGTCCCTCACATTGCCACCGGCGATCTTGTTCGCGAAGAGCTCGCGTCCTCCGGCACCCTATCTGCTCAGCTATCAGACATTGTAAATCAAGGTCAATTAGTCTCAGATGAAATCATAATAAGCTTATTGTCAAAGAGACTGGCTGCTGGGGAAGCGAAAGGTGAATCGGGTTTCATTTTTGATGGTTTCCCTCGTACAATAAACCAAGCAGAAATTTTGGATGGGGTAACGGACGTTGATTTAGTAGTTAATCTGAAGATCCGTGAAGATGTACTGCTTGAGAAATGCCTTGGTAGGAGACTTTGTAGTCAATGTGGGAAAAATTTTAACGTCGCTTCTATTAACATCAAGGGTGAGAATGGGAGTCCTGGAATCAGCATGGCACCTCTTCTCCCCCCTGCCCAATGCATGTCAAAACTTGTTACTCGTGCAGATGATACTGAAGAAGTGGTCAGAGAGAGACTTCGCATATACTATGACATGAGTCAACCTGTGGAGGAATTTTACCGCAGCCAAGGAAAACTGTTGGAGTTTGAGCTGCCAGGAGGGATTCCTGAATCCTGGCCAAAGTTGCTGCAAGCTCTTAATCTTGATGATTATGAGTCCAGACAGTCTGCTGCTGCATAA 960 0.4865 MVLIQHACGRGYGSRASLPSSPQASSLKAPVVSMAGIARLLRSTTSISHLAGKSFSSVAASQASPYNVPLFHLKPQFPRKDPRDRNVQWIFLGCPGVGKGTYASRLCNLLGVPHIATGDLVREELASSGTLSAQLSDIVNQGQLVSDEIIISLLSKRLAAGEAKGESGFIFDGFPRTINQAEILDGVTDVDLVVNLKIREDVLLEKCLGRRLCSQCGKNFNVASINIKGENGSPGISMAPLLPPAQCMSKLVTRADDTEEVVRERLRIYYDMSQPVEEFYRSQGKLLEFELPGGIPESWPKLLQALNLDDYESRQSAAA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1753 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 307 IPR027417 -
Lele14g1753 319 Pfam Adenylate kinase 92 284 - -
Lele14g1753 319 Gene3D - 77 308 IPR027417 -
Lele14g1753 319 TIGRFAM adk: adenylate kinase 88 307 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele14g1753 319 PRINTS Adenylate kinase signature 90 103 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 PRINTS Adenylate kinase signature 118 132 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 PRINTS Adenylate kinase signature 169 185 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 PRINTS Adenylate kinase signature 254 269 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 PRINTS Adenylate kinase signature 271 285 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 PANTHER NUCLEOTIDE KINASE 80 304 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 CDD ADK 88 290 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 Hamap Adenylate kinase [adk]. 87 307 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele14g1753 319 ProSitePatterns Adenylate kinase signature. 169 180 IPR033690 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1753 Lele-ChrLele14 24604041 24607574 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1119 06 6963173 6964876 Lele14g1753 14 24604041 24607574 CCT
Lele07g1300 07 7881151 7882814 Lele14g1753 14 24604041 24607574 CCT
Lele08g1107 08 6971772 6973472 Lele14g1753 14 24604041 24607574 CCT
Lele05g1252 05 7823308 7827850 Lele14g1753 14 24604041 24607574 CCT
Lele14g1753 14 24604041 24607574 Lele15g0597 15 3513599 3515784 hybridization
Lele14g1753 14 24604041 24607574 Lele16g0611 16 3439581 3441773 hybridization