Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1751 ATGGTTAGCGAGGGAGCGGTTGAAGTCGAAGTCGAAGTCGAAGAGTTGTATTTCTCTGCTCTCGGTTTCTCCTCGACTAAAGTGCTTTGCAACGAGTCGCGTAACCCAAATGTAATCCTAGTCATCCTTCCTTCAGAAGCCGTGTTCTTCCACGGTTTTGAGCAGAAGAAGGGTGGAAGCATTAACTCCAGCACTTCGAATTCTCAATCAATGGCGACTTCGACGCCAACTGATGGGTCTAGCAAGAAGGTGAGAAAGCCCTATACTATAACCAAGTCTAGAGAAAGCTGGACGGAGGAAGAGCACGATAAGTTTCTAGAAGCTCTTCAGCTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTTGGTTCAAAAACAGTTATCCAGATTCGTAGCCATGCCCAGAAATACTTCTTAAAAGTTCAGAAGAATGGGACAACTGCACACGTGCCTCCTCCACGACCTAAGCGCAAAGCTGCTCATCCATACCCACAGAAGGCACCAAAGAATGTTTTGGTTCCATTGCCAGCATCCATGGCTTACGTTTCTTCAACAAATACTATTGCACCTGGGTATGCCACATGGGATGAAACTTCAATACCGATTAATGCTGAATCAAACAGATACATACCATGTCAGGATGAAATCATCACCCTTCATGGGAATGAAGCTGATATTGGATCAAAGGGGATATCAAGGATTAGCAACAGTAGTCTCAGCGGTGTTGGGACCTCTACTAGAATGCTACAAAGTTCTGAGATGCCAAAGCAAGGGAAAAAAGGTCCAGTGCTTCACGGTTTACCGGACTTTGCTGAGGTTTACAGCTTTATTGGAAGTGTCTTTGATCCAGATACAAAAGGACATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTGATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACGTTGAGCCTTTTAACAAGGTTTTGTCATCATACGTTGGCAATACGAGGATAACAGAAGTTACTGCAGGAATTACTGCCAAAAAGGAAACGACAAACGATCTATCATGTCAACCTGCTTAA 1077 0.4336 MVSEGAVEVEVEVEELYFSALGFSSTKVLCNESRNPNVILVILPSEAVFFHGFEQKKGGSINSSTSNSQSMATSTPTDGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTTAHVPPPRPKRKAAHPYPQKAPKNVLVPLPASMAYVSSTNTIAPGYATWDETSIPINAESNRYIPCQDEIITLHGNEADIGSKGISRISNSSLSGVGTSTRMLQSSEMPKQGKKGPVLHGLPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETVLLLMRNLTVNLSSPDVEPFNKVLSSYVGNTRITEVTAGITAKKETTNDLSCQPA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1751 358 MobiDBLite consensus disorder prediction 59 87 - -
Lele14g1751 358 PANTHER SWI/SNF COMPLEX-RELATED 63 316 - -
Lele14g1751 358 CDD SANT 96 139 IPR001005 -
Lele14g1751 358 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Lele14g1751 358 Gene3D - 97 144 - -
Lele14g1751 358 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 141 IPR006447 GO:0003677
Lele14g1751 358 SMART sant 93 141 IPR001005 -
Lele14g1751 358 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Lele14g1751 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Lele14g1751 358 ProSiteProfiles SANT domain profile. 92 145 IPR017884 -
Lele14g1751 358 MobiDBLite consensus disorder prediction 59 86 - -
Lele14g1751 358 FunFam protein REVEILLE 6 isoform X1 96 144 - -
Lele14g1751 358 SUPERFAMILY Homeodomain-like 88 144 IPR009057 -
Lele14g1751 358 MobiDBLite consensus disorder prediction 146 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1751 Lele-ChrLele14 24592025 24598357 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele14g1751 Myb_DNA-binding 5.7e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1751 14 24592025 24598357 Lele15g0600 15 3530287 3534729 hybridization
Lele14g1751 14 24592025 24598357 Lele16g0614 16 3450284 3454521 hybridization