Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1749 ATGCCTGTTTGTCTGATTCCATTGGCAAGCTTTGGCATTATTAACTCAGGATTTTATGTAACTGATTGGAAAAATAATTTGCTATGTTCTTTTCGTATCACATTGGATGAAGAAGCTGGCGCCTGCCTCTTGTTTTTTCCCCCTTTGTTCTTGAAAACTTTTAAACCATTCTTTCCACACAATGAAGCAGCCATGAATGCTGCCCTGCTCCCACCTTCATTGTCATTCATCTTCTCATCTTCTTCAGTCTCTAACCCATACCCTCTTCACTGCGTCTCTCCTTTCAATCTCGCCGCCGCCGCCTCCAAACCCACTCAATCCTTTCTCGTTGGCGCCACTGCCAACTACGCCGATCCATCAGATCTGTCTTTTGTTTCCACCACTTCTGACCCGACTATCGAAGTCCTAGATCATAAACTGCTAACGCTCCTCCGCCAAAGGAAAACAGAGGAGGCCTGGATTGCCTACACCAACAGCGCTCACCTTCCTAGCCCCACTTGCCTCAGCCGCCTTGTTTCTCAATTATCCATCCAAAATACCCGCTCCGGTCTCACGCGCGCACAGTCCATAGTCACGCGCCTCCGTCATGAGCGACAGCTCCACCGTTTGGACGCCAACTGCCTTGGGCTACTGGCCGTGGCCGCTACTAAGCCCGGCTACACGTCCTACGCCACGTCAATCGTCAAGTCCATGCTTCGCTCTGGCTATCTTCCCCACGTGAAGGCCTGGAGTGCCGTCGTCAGTGGCCTTGCTTCTTCTGGCGACGACGGTCCCATGGAAGCTCTCAGGTTGTTCAAAGCGGTCATTAGGCGTGTACGAAAATTCAATGATCTTCAAATAGATTCAAACTCGCGGCCTGACACTGTTGCATTTAACGCCGCGTTAAATGCCTGTGCGAACTTGGGTGATAGTGAGAAGTTCTTGCATGTGTTTGATGAAATGCCCCAATATGGTGTTGAACCTGATGCCTTGACTTATAATGTCATGATAAAGCTATGTTGTAAAACGGATAGAAAAGACCTGCTTGTGTTTGTATTGGAGAGGATCTTAGAAGTGGGAATTTCTCTATGCATGACTACTTTGCATTCCCTAGTCGCAGCCTATGTTGGTTTTGGTGACATGAAGACAGCTGAGAAGTTGGTTCAAGCAATGAGGGAACAAAGAAAGGATCTTTGCAAGATACTAAGGGAGTCCAATTCAGAACATTTGGTTGAAAATGACGAATCCGTTTTCAAGAAGCTGCTTCCAAATTTGACAAAACAGAGTGACAATGAACCGCCATTGCTGCCAAAAGTATACGCTCCCAACTCCAGAATTTACACCACTCTAATGAAAGGCTACATGCAGGCAGGTCGTGTGATTGATACAGTGAGAATGCTTGAGGCAATGCGCAGGCAGGATGATCGTTCCAGTCATCCCGATCATGTATCATACACCACTGTTGTTTCAGCACTTGTGAAGGCAGGTTCAATGGACAGGGCTCGTCAAATCCTTGCTGAAATGACGAGAATTGGGGTGCCTCCAAATCTGATTACCTACAATATTCTGCTTAAGGGTTATTGTTTGCAGTTGCAGATAGATCAGGCAAGGGGGCTACTTAAAGAGATGGTTGATGATGCAGGGATACAGCCTGATGTGGTTTCCTACAACATTCTGATTGATGGATGTATATTAGTTGACGACAGTGCTGGGGCTCTTGCCTTCTTTAACGAAATGAGAGCAAAAGGAATAGCTCCCACTAAGATTAGTTATACTACTTTGATGAAAGCTTTTGCTTTTTCAGGTCAACCAAAGCTGTCTCATAGGGTTTTTGATGAGATGCTCAATGATCCTCGGGTTAAGGCCGATAGAATCGCCTGGAATATGTTGGTGGAAGGATATTGCAGACTAGGGTTGATTGAAGAAGCAAAGAAAATAATTGAAAAGATGAAGAATAATGGATTGTATCCTGATGTGGCCACTTATGGTAGTCTTGCCAATGGAATAGCATTAGCGAGAAGACCAGGAGAGGCACTTCTGCTTTGGAATGAAGTGAAGGAGAGGTGTAGGGTTGAGAAGGGAGAGGGCAAAACTGATTCATCTATTGCGCCACCACTCAAACCAGATGAAGGGCTTTTAGATACTTTGGCTGATATCTGTGTGAGGGCTGCATTCTTTAGGAAGGCCTTGGAAATTGTGGCTTGCATGGAAGAACATGGGATACCTCCCAACAAGACCAAGTTTACTAGAATATATGTGGAAATGCATTCAAGAATGTTCACAAGTAAGCATGCTTCAAAGGCAAGACAGGACAGAAGGATTGAGAGGAAAAGAGCAGCTGAGGCTTTCAAGTTTTGGTTGGGATTGCCTAATTCTTATTATGGAAGTGAGTGGCGTTTGGAACCTATTGATGGATATGATTCTGATTCGGTTTAG 2415 0.4555 MPVCLIPLASFGIINSGFYVTDWKNNLLCSFRITLDEEAGACLLFFPPLFLKTFKPFFPHNEAAMNAALLPPSLSFIFSSSSVSNPYPLHCVSPFNLAAAASKPTQSFLVGATANYADPSDLSFVSTTSDPTIEVLDHKLLTLLRQRKTEEAWIAYTNSAHLPSPTCLSRLVSQLSIQNTRSGLTRAQSIVTRLRHERQLHRLDANCLGLLAVAATKPGYTSYATSIVKSMLRSGYLPHVKAWSAVVSGLASSGDDGPMEALRLFKAVIRRVRKFNDLQIDSNSRPDTVAFNAALNACANLGDSEKFLHVFDEMPQYGVEPDALTYNVMIKLCCKTDRKDLLVFVLERILEVGISLCMTTLHSLVAAYVGFGDMKTAEKLVQAMREQRKDLCKILRESNSEHLVENDESVFKKLLPNLTKQSDNEPPLLPKVYAPNSRIYTTLMKGYMQAGRVIDTVRMLEAMRRQDDRSSHPDHVSYTTVVSALVKAGSMDRARQILAEMTRIGVPPNLITYNILLKGYCLQLQIDQARGLLKEMVDDAGIQPDVVSYNILIDGCILVDDSAGALAFFNEMRAKGIAPTKISYTTLMKAFAFSGQPKLSHRVFDEMLNDPRVKADRIAWNMLVEGYCRLGLIEEAKKIIEKMKNNGLYPDVATYGSLANGIALARRPGEALLLWNEVKERCRVEKGEGKTDSSIAPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEEHGIPPNKTKFTRIYVEMHSRMFTSKHASKARQDRRIERKRAAEAFKFWLGLPNSYYGSEWRLEPIDGYDSDSV 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 322 356 IPR002885 -
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 287 321 IPR002885 -
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 616 650 IPR002885 -
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 474 508 IPR002885 -
Lele14g1749 804 PANTHER BNAC05G43320D PROTEIN 66 783 - -
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Lele14g1749 804 Pfam PPR repeat family 544 592 IPR002885 -
Lele14g1749 804 Pfam PPR repeat family 473 521 IPR002885 -
Lele14g1749 804 Pfam PPR repeat family 616 661 IPR002885 -
Lele14g1749 804 Pfam PPR repeat family 286 335 IPR002885 -
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 436 470 IPR002885 -
Lele14g1749 804 TIGRFAM PPR: pentatricopeptide repeat domain 439 466 IPR002885 -
Lele14g1749 804 TIGRFAM PPR: pentatricopeptide repeat domain 289 323 IPR002885 -
Lele14g1749 804 TIGRFAM PPR: pentatricopeptide repeat domain 619 652 IPR002885 -
Lele14g1749 804 TIGRFAM PPR: pentatricopeptide repeat domain 476 509 IPR002885 -
Lele14g1749 804 TIGRFAM PPR: pentatricopeptide repeat domain 511 546 IPR002885 -
Lele14g1749 804 TIGRFAM PPR: pentatricopeptide repeat domain 547 580 IPR002885 -
Lele14g1749 804 Pfam PPR repeat 439 465 IPR002885 -
Lele14g1749 804 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 509 544 IPR002885 -
Lele14g1749 804 Gene3D Tetratricopeptide repeat domain 428 560 IPR011990 GO:0005515
Lele14g1749 804 Gene3D Tetratricopeptide repeat domain 561 785 IPR011990 GO:0005515
Lele14g1749 804 Gene3D Tetratricopeptide repeat domain 258 414 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1749 Lele-ChrLele14 24576990 24580153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1749 619 754 Glycosyltransferase AT1G05670 25.658 5.18e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1749 14 24576990 24580153 Lele15g0604 15 3545645 3551413 hybridization
Lele14g1749 14 24576990 24580153 Lele16g0617 16 3466331 3468556 hybridization