Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1748 ATGTCCGGAACTCCGTTAGAGAGGCACATAGTTGGATATGGCTCCTTGAATCCAAGTGGTTTCATGGATGTAGTGGGCATTTATTTTCCTCAGCAGGTTTTCGCAGTCGAACAAAGCTGGCTCGACCTCACGTCTGCTCTCTTCTCTTACCTAACTTCCCAGTTAATACTCCCGCCTTTACCTTGTCACTTGACTTCCAGCAGTTTCAAAAAATGTCATATTGAGGAATTTTATAAAATGTTAGAGGAGAAACCTAAAATCGGTCCCTTGTGCATGAGCGCTGTAAGACAACTTGTCTCATTGCGTGGAACTGTTGTGAAGGCCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGTTTTGAATGCGGAAAAGTCTTCTTCAACATTTTATTCTTCCTGCGGGAGTTTCAGGTTCTTAAAACCCTTAATGTATATGAGTTTTTGTCCTTTGCTGTACGATTTTCATGCTGCACCAGGTTGCAAGAACTCCTAAAATCCGAAGACCATGAAGAAGGACGAGTTCCTCGGACAGTGGAACGTGAGCTTATCCAAGATCTGGTTGATACATCCATACCTGGAGATGTGTTGACTGTTACTGGAATTATAAGAGGAACTAACACGTACATCGATGTTGGAGGAGGAAAGTCAAAGAACAGAAGCCAGGGATTTTACTTTTTGTATCTCGAAGCTGTTTCTATACAAAATTCCAAGTCACAGTCTACAAATGAGGATTTGCAAGCCACTAATCCCAAAGCAAGACCAGCTGAGCTGCTTGCTTTGTTTTCATTTTCTTCCAGGGATTTAGAGTATATCTATGTTGCACATCCAATGGCTGAAAATGTTTTACTTGTGGATGGCAGTGATCCTGAACTAGGCAAGAGCCAATTGCTACAGGCAGCAGCTTCTGTTTCTCCACGAGGCATCTATGTCTGCGGTAATGCGACCACAACAGTCGGCCTCACAGTAGCTGTAGGAAAGGATCCTATGACGAGTGATTGTGCTTTCGAGGCCGGTGCTATGGTGTTGGCTGACAGTGGATTGTGTTGTATTGATGAGTTCGATAAATGTCAGCCGAACATCAGCTGGAAAATGAGTGCTGCTCTGCTGTCCCGATTTGATTTAGTTTTCATACTGCTGGACAAGCCTGAAGAACTTCTGGACAAGCGAGTCTCGGAGCACATTATGTCACTTCATGCTGGGAATGGACAACTAGCAGTCAAAAGGCAACGTAGAGACTTATCTTCTGATTCGAGAATTACGGTACCACAGAATGCTGAAAGCATAGATTTGGGGGTTAGATCTGGTTCTTTGGTTTCCAAGTTGAGACTTGACCCACAAAGAGATAGTGATTTAGTTCCATTGCCTTATCAACTTCTTCGAAAATACATTGCTTATGCGAGGAATTTTGTCTTTCCTAGTTCAGATAATGAAGGAATCCCCCTGTATGATAAATACGTAGATGAGCATGGATTTGTGGATTTTGCACGAAGTGTGGGGATGAGTCAACAGAAAGAGGCGAAACGCTTCCTAAGTGCCCTCAATTAA 1545 0.4337 MSGTPLERHIVGYGSLNPSGFMDVVGIYFPQQVFAVEQSWLDLTSALFSYLTSQLILPPLPCHLTSSSFKKCHIEEFYKMLEEKPKIGPLCMSAVRQLVSLRGTVVKASTVRPLVVEMSFECGKVFFNILFFLREFQVLKTLNVYEFLSFAVRFSCCTRLQELLKSEDHEEGRVPRTVERELIQDLVDTSIPGDVLTVTGIIRGTNTYIDVGGGKSKNRSQGFYFLYLEAVSIQNSKSQSTNEDLQATNPKARPAELLALFSFSSRDLEYIYVAHPMAENVLLVDGSDPELGKSQLLQAAASVSPRGIYVCGNATTTVGLTVAVGKDPMTSDCAFEAGAMVLADSGLCCIDEFDKCQPNISWKMSAALLSRFDLVFILLDKPEELLDKRVSEHIMSLHAGNGQLAVKRQRRDLSSDSRITVPQNAESIDLGVRSGSLVSKLRLDPQRDSDLVPLPYQLLRKYIAYARNFVFPSSDNEGIPLYDKYVDEHGFVDFARSVGMSQQKEAKRFLSALN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1748 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 292 485 IPR027417 -
Lele14g1748 514 ProSiteProfiles MCM family domain profile. 253 355 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g1748 514 SUPERFAMILY Nucleic acid-binding proteins 83 206 IPR012340 -
Lele14g1748 514 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 70 247 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele14g1748 514 SMART mcm 83 514 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele14g1748 514 Gene3D - 86 238 IPR012340 -
Lele14g1748 514 Pfam MCM P-loop domain 363 398 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g1748 514 Pfam MCM P-loop domain 279 358 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g1748 514 Gene3D - 361 505 IPR027417 -
Lele14g1748 514 Gene3D - 251 360 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1748 Lele-ChrLele14 24570847 24576044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1748 95 485 Core DNA Replication Machinery Family AT3G09660 45.000 1.54e-120 370