Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1744 ATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAGAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGACTTCAGACTCATACTTGGAAACTGACAATGCACCACCTCTTCCTCCACCAGAAGAGGTCAAATTAACTAATATTGAGAGTGAAAACAATCATTCTCCCGATGTCAAAGTTGCGACTGCTGCAGATATTGAGGAGCCTGTTCCTGCTGTTCAAACAGCCCCTGTTCCAGTTCAAGCCGCTATAATTCCTCAGTCTTCTAGGAAATTAAGTACTGAAGTAGCAGCAATTAAGATTCAAACAGCTTTTCGAGGATACTTGGCAAGAAGAGCATTAAGGGCTTTAAGAGGCTTGGTTAGGTTGAAATCTCTGATGGAAGGGCCAATTGTAAAACGCCAAGCTGCTAGTACTCTTCGCTCGACGCAGGCTCTAGCTCATGTGCAGTCTCAGATTCGATCCAGGAGGATCATAATGCTAGAGGAGAATCAAGCTATTCAGAGACAGTTCTTACAGAAGCATGCAAAAGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGACAGCCTGCAATCAAAGGAACAAATTGAAGCCAAGTTACTGAGCAAGTACGAGGCCACAGTCAGGAGAGAAAGGGCACTGGCTTATGCATTTTCTCACCAGCAAAATGGGAAGAATTCATCCAGATCTATAAATCCTGTATTTATGGATCCAACCAACCCGGCATGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGGCCCTGGGAGAGCAAAGATGTGAATGACCAGTCATCGGTCAATAGCTCGAGCCGCAGCATCACCGATGGAGAAATAATTAAATCCTATGCTCGTTACCAGCTCAATTCTGAAAAACACTCTCCAACGGCTAGCCAAAACCTAGGCTCCCCTAGCTTTCACTCCCACACAACTCCTTCCAAGGCACTTGCTTCTTCAGCATCAGTTGGCAAAAAACTGAAGAAAGTGAGCCCCAAGGAAATCTCGGTCATCGATGATGACTCTAAAAGCATGGTTAGCGGGCAGTCCAGTTTTCGGAGGCACTCGATTGCTGGATCATCTGTGAGAGATGATGAGAGCCTCGCAGGCTCTCAGGCAGTTCCAAGCTACATGGTGCCGACTCAGTCTGCAAAAGCCAAGTCCAAGACAATGAGTCCATCAGCAGCAGAGAATGAAGCAGTAGAGAAGGGATCCTCTGGGACAGCGAAGAAACGGCTTTCTTTCCCTCCTTCACCGGCAAGGCCAAGACGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCAGAGGTCACCGTGGGTAAATAG 1389 0.4708 MGRKGNWFSSVKKALSPDSKKREDERSNKSKKKWFGKQKLQTSDSYLETDNAPPLPPPEEVKLTNIESENNHSPDVKVATAADIEEPVPAVQTAPVPVQAAIIPQSSRKLSTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAASTLRSTQALAHVQSQIRSRRIIMLEENQAIQRQFLQKHAKELSLQMGDEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFSHQQNGKNSSRSINPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVNSSSRSITDGEIIKSYARYQLNSEKHSPTASQNLGSPSFHSHTTPSKALASSASVGKKLKKVSPKEISVIDDDSKSMVSGQSSFRRHSIAGSSVRDDESLAGSQAVPSYMVPTQSAKAKSKTMSPSAAENEAVEKGSSGTAKKRLSFPPSPARPRRHSGPPKVESSFNAEVTVGK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1744 462 MobiDBLite consensus disorder prediction 310 462 - -
Lele14g1744 462 MobiDBLite consensus disorder prediction 15 31 - -
Lele14g1744 462 MobiDBLite consensus disorder prediction 393 420 - -
Lele14g1744 462 MobiDBLite consensus disorder prediction 1 60 - -
Lele14g1744 462 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Lele14g1744 462 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lele14g1744 462 PANTHER IQ-DOMAIN 5-RELATED 1 447 - -
Lele14g1744 462 SMART iq_5 111 133 IPR000048 GO:0005515
Lele14g1744 462 MobiDBLite consensus disorder prediction 310 338 - -
Lele14g1744 462 Gene3D - 98 140 - -
Lele14g1744 462 MobiDBLite consensus disorder prediction 361 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1744 Lele-ChrLele14 24557081 24559516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1744 1 452 IQD Protein Family AT5G03040 53.138 5.37e-137 400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1232 05 7710209 7712937 Lele14g1744 14 24557081 24559516 CCT
Lele14g1744 14 24557081 24559516 Lele15g0609 15 3569246 3573009 hybridization