Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1743 ATGCTTTCTAGTGACCCGACCTTATCATCGCCAGCGTTAGTTTCATCTTCTGAAAGACACAGTCCATTCGGAAGTCCCAGTTCTGTCATCCAAGTAGTAAAATTCTTGCAACCTCAGTGGAAGAAAACTGAAAAGGGTTTAAATCCCCCAGCACTGGTCTTTGTCCAAAGCAAGGAGCTAGCAAAAGAACTGTATGGTGAACTTCAATTTGGCAACCTCAGAGTTGGTGTTATCCATTCTGATTTGTCTCAAAAGGAGCGAGAAGATGCTGTTGATAATTTTAGAGGCGGCAAAACGTGGGTTTTGATTGCTACTGATATAGTTGCTCGAGGCATGGATTCCAAAGCTGTGAAATGTGTGATTAATTATGATTTTCCAGATTCTGCTGCTGCTTACATCCATAGGATCGGTCGTTCTGGGAGAGCAGGGAGGGCTGGAGAAGCTATAACATTTTATTCGGAGGAAGACATGCGCTTGCTGCGTAATATGGCCAATCTGATGGCAACATCAGCTTTGAAAGAAACAGCATCATCCGACAGCTTGTGCATGCTGGTTACAGAGAAGCTGAAAGAAGCTGCTCAGTTTGTTTTTGTTTCTTTCCATTCTTATGAGGACCAAGTTGTATTTCTGGCCATGTCTTTCATGATTACTCGTACTTCGGATTTTCTCCCCAAAAGCAACTGGTTTTACAGAAAAATGGGGTCATTGGAAAGATCAAAGAAGGGAATTCATTTGTGGAAGAAAGCCATGATCCATTTCTCTCTATGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCAACAGGTAAATCTTCTTTCGTGTCAACACAAGCAACTTCTGCCTCCAATGGGACAGAATTTGCACCACAAGCTATTGAAATGTCACACGACCAGACAACAAATGTCAATAGAAGTTTGATATCTCCGAGTTCTAGGATCCCCAAACACAAGATAGATTCACATGTACAAGAAGAGCCGAGTTTGAAGCCAAGAAAACACTTAATCATTGTCACTCCAACGAGCATCAAAATTCCCTTTCAAGCAGTATTATTGAGGAGGTTGGCGAATACTATAAAGTTGGTTCCTCAGCCATTGTTGTGGATTGTGGTGGAACCACCAACGGAGTCCCCTGAACTTCCGGAGATACTAAGGAAAACAGGAATCATGTACAGACATTTGGTGTCCAAGGAAAACTTCACAGACCTGGAAGCTGAGCTGAATCATCAGAGAAATCTTGCTCTCAAGCACATCGAACACCATAAGCTAAGTGGGATTGTTCACTTTGCTGGGCTTTCCAATGCTTATGATCTCGAATTCTTCCACCAGCTTAGAGATATTGAGGTATTTGGAACATGGCCAGTGGCACTATTAGCAGCGAACAGGAAGAAAGTAATGATAGAAGGGCCAGTTTGTGATTCTTCACAAGTCATAGGTTGGCATCTGAAGAATATCAACAATAATGAATCTGTTTCTACCACTCCTCCCCTCCACATTTCAAGTTTTGCATTCAATAGTTCCATTCTTTGGGACCCTGAACGGTGGGGTCGCACTTCTTCTGTTCAAGACACGTCTCAGAATTCAATCAAAATTGTGAAGCAAGTGGTATTAGAAGATGAATCGAAGTTAAATGGGATTCCGCCAGAGGGATGCTCCAGAATCATGATATGGCGTTTCAATTTTCAACCTCCTCTCACTCCAAGATATCAAATCTTAACTTCTACGCCTAATGGTAGACCCAGCTAA 1743 0.4246 MLSSDPTLSSPALVSSSERHSPFGSPSSVIQVVKFLQPQWKKTEKGLNPPALVFVQSKELAKELYGELQFGNLRVGVIHSDLSQKEREDAVDNFRGGKTWVLIATDIVARGMDSKAVKCVINYDFPDSAAAYIHRIGRSGRAGRAGEAITFYSEEDMRLLRNMANLMATSALKETASSDSLCMLVTEKLKEAAQFVFVSFHSYEDQVVFLAMSFMITRTSDFLPKSNWFYRKMGSLERSKKGIHLWKKAMIHFSLCFVMGFFTGFAPTGKSSFVSTQATSASNGTEFAPQAIEMSHDQTTNVNRSLISPSSRIPKHKIDSHVQEEPSLKPRKHLIIVTPTSIKIPFQAVLLRRLANTIKLVPQPLLWIVVEPPTESPELPEILRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIEHHKLSGIVHFAGLSNAYDLEFFHQLRDIEVFGTWPVALLAANRKKVMIEGPVCDSSQVIGWHLKNINNNESVSTTPPLHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKIVKQVVLEDESKLNGIPPEGCSRIMIWRFNFQPPLTPRYQILTSTPNGRPS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1743 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 172 IPR027417 -
Lele14g1743 580 SUPERFAMILY Nucleotide-diphospho-sugar transferases 332 571 IPR029044 -
Lele14g1743 580 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 244 563 IPR005027 GO:0015018|GO:0016020
Lele14g1743 580 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 333 574 IPR029044 -
Lele14g1743 580 SMART helicmild6 62 143 IPR001650 -
Lele14g1743 580 Pfam Glycosyltransferase family 43 354 559 IPR005027 GO:0015018|GO:0016020
Lele14g1743 580 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 28 184 IPR001650 -
Lele14g1743 580 CDD SF2_C_DEAD 29 152 - -
Lele14g1743 580 Pfam Helicase conserved C-terminal domain 49 143 IPR001650 -
Lele14g1743 580 FunFam Glycosyltransferases 332 572 - -
Lele14g1743 580 Gene3D - 25 214 IPR027417 -
Lele14g1743 580 CDD GlcAT-I 334 562 IPR005027 GO:0015018|GO:0016020
Lele14g1743 580 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1743 Lele-ChrLele14 24546908 24553098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1743 233 560 Glycosyltransferase AT2G37090 60.290 1.03e-142 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1097 06 6822036 6826112 Lele14g1743 14 24546908 24553098 CCT
Lele07g1278 07 7740589 7743343 Lele14g1743 14 24546908 24553098 CCT
Lele08g1084 08 6840740 6842545 Lele14g1743 14 24546908 24553098 CCT
Lele05g1231 05 7704496 7706363 Lele14g1743 14 24546908 24553098 CCT
Lele14g1743 14 24546908 24553098 Lele15g0610 15 3574850 3576806 hybridization
Lele14g1743 14 24546908 24553098 Lele16g0622 16 3483575 3491295 hybridization