Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1733 ATGTTTGAGAATGATCATGACCAAAGTTGGAATTCTATGCATACTGACCAACAGTATGTGCACCTTGGTAGAGCTAGCACTTCAGAGAATGGTTCTTTTGTTTATCCTGTGGAAAATATGTCTGTAGATGGCATTTCTTTTGCCTCTAATTGGAATCCTACTACAATGTCAAATGGGTTTGCATCCTCAAGTCTCAATATTGAAGTACCACCTCATCAATCTGATGCATCAGGCGCTGCTTCTCATGATCATTTTCTGCATTCATCAAGTGCTGCGGCCTTCATTGCAGTTTCTGAAAATTATGCTCATCAGCCTCCTTCTTCCAATTATGATAGACAGCCATTTCATGTCGTTGGTGGTGGTTTTATTGATCTTACAATGGGAAATGGAAGAGGGCCTCACAAGCGGAAGAGCCCCGGAATTCCTCCAGTCTGTGAGAGAGGTAGTACAAGCAGATGCATAAATGCTGGAAGTTCAACTGATCTTCCAATGTCTTCAGAACTACGGCAGGAGAAGCCAAATATGGATTCTCAATATTTGCCTCGGGATCAAATTACCATGCCACTCACCTTCAGAGGTAGTGGCCTTTCAATCAGGGGTGAGGGTTCCTTGAGAAATGTGAGAAGCCGTTCTGCACTTGATTTTGAATCCAACCTGGCTAGGACCCATTTATCTGCCAATCATTCACACAACTACTCCGCTGGCCTACCCATTGACCATTCTAGCACATTGGATCTCTCAGGTCAGAGTTCTAGCACATTAACAAGGGATTGGAGCCAAATGAGCACATCTCATGCTCATGGCAGGGTGCTATTACCAGATACAAGTGCTCTTAATTGTGAGCCAATCCCCTTCGTTGTTGGAAGTGGGGCTAGTAATGCCTCTGTAGATGTTGGGGGTTACCATCATGAATTCGGTACAAGCAGAAATCCTATTGCACCTCAAAGTTTTCATAATAATCTGACTCAGGCTGCTAGGGGAGTGCGAAGCAACTTTTCACAAAGGTCTACTCCACCTTTTAGATCTTCTTCAAGCTTGCGCTTGGGACATGTAGCGCCATCAGATGATGGATTGCAAATGGTTGCCAATAATTACTCCTCAAGACATCCAAGGCCATTGACAACCGTTGGCTGGCGGAACAGTGACAGAAATGGAAGGTTAAGGATATCTAGTGATAGATATCGACCATCGGCTGATGCACCTAGTCTCCACGACCGATTTTCTTCAGAGGGTTTCATGATTGTGGACCGTGGGTTGCCATATGGATCTAGAAGTATGGTTGATCAGCATACGGACATGAGGATGGACATAGACAACATGAGCTATGAGGAACTACTCGCCCTTGGAGAGAGGATTGGTCATGTCAGCACAGGATTGACTGAGGATTTGATTTCAAAATGCATGACAGAAACAATATATTGTTCATGTGAGCAAAGTCAGGAGGAAGGAACTTGTGTAATATGTTTGGAAGAATACAAGAACATGGATGACGTTGGGACGCTGAAAATTTGCCGTCACGACTACCACGTGAGCTGCATTAGAAAGTGGTTATCAATGAAGAACAAATGTCCAATCTGCAAAGCTTGTGCTCTGCCAGATGATAGGAAGGATAAATAA 1617 0.4397 MFENDHDQSWNSMHTDQQYVHLGRASTSENGSFVYPVENMSVDGISFASNWNPTTMSNGFASSSLNIEVPPHQSDASGAASHDHFLHSSSAAAFIAVSENYAHQPPSSNYDRQPFHVVGGGFIDLTMGNGRGPHKRKSPGIPPVCERGSTSRCINAGSSTDLPMSSELRQEKPNMDSQYLPRDQITMPLTFRGSGLSIRGEGSLRNVRSRSALDFESNLARTHLSANHSHNYSAGLPIDHSSTLDLSGQSSSTLTRDWSQMSTSHAHGRVLLPDTSALNCEPIPFVVGSGASNASVDVGGYHHEFGTSRNPIAPQSFHNNLTQAARGVRSNFSQRSTPPFRSSSSLRLGHVAPSDDGLQMVANNYSSRHPRPLTTVGWRNSDRNGRLRISSDRYRPSADAPSLHDRFSSEGFMIVDRGLPYGSRSMVDQHTDMRMDIDNMSYEELLALGERIGHVSTGLTEDLISKCMTETIYCSCEQSQEEGTCVICLEEYKNMDDVGTLKICRHDYHVSCIRKWLSMKNKCPICKACALPDDRKDK 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1733 538 MobiDBLite consensus disorder prediction 151 165 - -
Lele14g1733 538 SMART ring_2 485 526 IPR001841 -
Lele14g1733 538 Pfam Ring finger domain 484 527 IPR001841 -
Lele14g1733 538 SUPERFAMILY RING/U-box 476 531 - -
Lele14g1733 538 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 450 531 - -
Lele14g1733 538 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 450 531 IPR013083 -
Lele14g1733 538 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 130 531 IPR045191 GO:0061630
Lele14g1733 538 MobiDBLite consensus disorder prediction 329 348 - -
Lele14g1733 538 ProSiteProfiles Zinc finger RING-type profile. 485 527 IPR001841 -
Lele14g1733 538 MobiDBLite consensus disorder prediction 131 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1733 Lele-ChrLele14 24515128 24517553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1733 1 537 C3H Transcription Factor Family AT2G37150 39.636 4.59e-100 311