Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1730 ATGAGCGTCATCGACATTCTGACCAGAGTCGATTCGATCTGTAAAAAGTACGATAAATACGACATCGACAAGCGCAAGGACTCTAACGTTTCTGGCGACGATGCCTTTGCTCGACTATACGCCGTTGTCGACGCCGACATCGAGGCTGCTCTTCAGAAAGCAGAAACCGCTTCCAAGGAGAAAAGTAGGGCATCTACCGTGGCGATCAACGCGGAGCTTCGTCATACCAAGGCTCGGCTGCTGGAGGAGGTCCCCAAGTTGCAGAGGCTGGCGGTCAAAAAGGTAAAGGGGCTTCAACCAGAAGAATTTGCAGCACGTAATGATTTGGTTCTTGCATTGCCAGACAGGATTCAAGCTATCCCGGATGGGGCTCCAGCTGCCCCCAAACAAACTGGAGGCTGGGCAGCTTCTGCTTCACGTACTGAAATTAAATTTGATTCAGATGGACAATTTGACAATGAATACTTCCAGCAAACTGAGGAATCAAGTGGATTTAGGAAGGATTATGAAATGCGTAGGATGAAGCAGGATCAAGGTTTGGAAGCGATCTCAGAAGGATTGGATACATTGAAAGACATGGCACATGATATGAATGAGGAACTTGATAGACAAGTCCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCAGCCTCTGATCTCAAGAATACAAATGTCAGACTTAAAGACACAGTCAATCAGCTTCGATCCAGTCGAAACTTCTGCATTGATATTGTGTTGTTGATTATAATTCTGGGAATTGCTGCCTATTTGTACAATGTACTAAAGAAATGA 798 0.4574 MSVIDILTRVDSICKKYDKYDIDKRKDSNVSGDDAFARLYAVVDADIEAALQKAETASKEKSRASTVAINAELRHTKARLLEEVPKLQRLAVKKVKGLQPEEFAARNDLVLALPDRIQAIPDGAPAAPKQTGGWAASASRTEIKFDSDGQFDNEYFQQTEESSGFRKDYEMRRMKQDQGLEAISEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1730 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Lele14g1730 265 CDD SNARE_Qc 175 230 - -
Lele14g1730 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele14g1730 265 SUPERFAMILY SNARE fusion complex 168 230 - -
Lele14g1730 265 Coils Coil 70 90 - -
Lele14g1730 265 Coils Coil 219 239 - -
Lele14g1730 265 FunFam Putative syntaxin-71-like 170 231 - -
Lele14g1730 265 SMART tSNARE_6 166 232 IPR000727 -
Lele14g1730 265 Pfam SNARE domain 207 256 IPR000727 -
Lele14g1730 265 Gene3D - 170 231 - -
Lele14g1730 265 PANTHER SYNTAXIN 45 252 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1730 Lele-ChrLele14 24499138 24501734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1730 1 264 SNARE and Associated Proteins AT3G09740 75.188 7.40e-150 417