Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1729 ATGCAAATGATGTCTGGCGACCCTTTCTCCTTATCCACTTCCATCGGAGGCTTTGCTCCACAACAAAACCCAACTCCAAACCTTAACCCTAAACCTAATCCCAAGAAGAAAAGGAATCTCCCAGGAACACCAGATCCAGATGCGGAGGTCATCGCGCTTTCACCGAAAACTCTCATGGCAACCAACAGGTTCATTTGCGAAATATGCAACAAAGGGTTTCAGAGAGATCAGAACCTTCAGCTTCACCGGAGGGGTCACAACCTTCCATGGAAGTTACGACAAAGGTCCAACAAAGAAGTTCGAAAGAAGGTCTACATCTGCCCGGAGAAGACGTGCGTCCACCATGATCCATCCAGAGCACTGGGCGACCTCACTGGCATAAAGAAGCATTTTAGCAGAAAACATGGGGAGAAGAAATGGAAGTGTGATAAGTGTTCTAAGAAATACGCAGTCCAATCTGACTGGAAAGCTCACACCAAGACTTGTGGAACAAGAGAATACAAGTGCGATTGTGGGAACCTATTCTCCAGAAAGGACAGCTTCATCACACACAGAGCTTTCTGCGACGCATTGGCGGAAGAGAGTGCGAGACTCACCTCGGTTGCTACAAGTCTGAATTTGAAGAACGAAGGGAACACGATGAGCTCACAACCTAGTCCGCTGGGACTTGAAAACAACGCAGAGCTAATTTCTCAATTCGGCTCTCATGGATTTCGTGCAGAGCTCAACGGAATGGGAATGGGTGCCGACCAGCAAAGAGCAAGCTTATCAATGTGGTTGAACCAGGGAAATAACAATGGTCTTGATGTTGGAGGGCTATACGGATCTTCAAGTTGTTCTTCAGGTTTGGGTGAGCATATGGCACAAATGACGAGCCAAGCTAATCATAATGCTTTTGGTGGGTCTTGTAATTTTGGAATGCCTGCTTCGAATTCAACAAGCGCTGGACTTCTACTATCAAGTGGGAAAAGGGGTGAAGCTATGTCAAAGCCAGCTTCTCCCATGTCAGCTACTGCTTTACTTCAGAAAGCAGCTCAGATGGGTTCCACCAGAAGCAGCGATAACAGCAACAATCCCTCTATTTTCAGTGGCACTTTGGGAGTGATGTCGTCGTCTTCTAATTCTCACACGGTGACAAATCTCAATGACAACAACACCACCAATAATAATCCCCAGAATTTTAATTCAACTAGAAGTGCCGAATCAGTGCTGGCAGACAACAACTTTAGCTCGTTCACGCATGCATTGAACGGTCCTAATCTTGACCAGCTCTTGATGCAGACCGGCGCAAAGCAAAGTGAACAGCAAGTGCAATTGAAGCTTTACCCAGGTGGTTCATCAGAACATAATTTAACAAGAGATTTTCTTGGCATGGCCGGTGGCGGTGGCGCCGGAGGAGCTGGGCCTCCTCCTCCATTTCTGCCGCAAGAGCTGGCAAAGTTTGCGTCCATTGGCTCACCCATGGGTTTAACACAATTCACTGCCAACCATTGA 1494 0.4726 MQMMSGDPFSLSTSIGGFAPQQNPTPNLNPKPNPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGNLFSRKDSFITHRAFCDALAEESARLTSVATSLNLKNEGNTMSSQPSPLGLENNAELISQFGSHGFRAELNGMGMGADQQRASLSMWLNQGNNNGLDVGGLYGSSSCSSGLGEHMAQMTSQANHNAFGGSCNFGMPASNSTSAGLLLSSGKRGEAMSKPASPMSATALLQKAAQMGSTRSSDNSNNPSIFSGTLGVMSSSSNSHTVTNLNDNNTTNNNPQNFNSTRSAESVLADNNFSSFTHALNGPNLDQLLMQTGAKQSEQQVQLKLYPGGSSEHNLTRDFLGMAGGGGAGGAGPPPPFLPQELAKFASIGSPMGLTQFTANH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1729 497 Gene3D Classic Zinc Finger 118 197 - -
Lele14g1729 497 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 26 464 IPR031140 -
Lele14g1729 497 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Lele14g1729 497 FunFam protein indeterminate-domain 5, chloroplastic-like 118 197 - -
Lele14g1729 497 SMART c2h2final6 64 86 IPR013087 -
Lele14g1729 497 SMART c2h2final6 140 160 IPR013087 -
Lele14g1729 497 SMART c2h2final6 105 135 IPR013087 -
Lele14g1729 497 MobiDBLite consensus disorder prediction 343 396 - -
Lele14g1729 497 Pfam Zinc-finger double-stranded RNA-binding 64 86 IPR022755 -
Lele14g1729 497 MobiDBLite consensus disorder prediction 1 24 - -
Lele14g1729 497 SUPERFAMILY beta-beta-alpha zinc fingers 63 160 IPR036236 -
Lele14g1729 497 MobiDBLite consensus disorder prediction 1 48 - -
Lele14g1729 497 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
Lele14g1729 497 FunFam protein indeterminate-domain 12-like 43 111 - -
Lele14g1729 497 Gene3D Classic Zinc Finger 42 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1729 Lele-ChrLele14 24487931 24489773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1729 1 245 IDZ Gene Family AT5G03150 64.875 1.42e-121 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele14g1729 zf-C2H2_jaz 7.2e-05 CL0361