Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1724 ATGGGTAACATAGGAAGTAGTGGCGCTAACAACAACCGCCGTAGGCACAGCGCAAGTGGCAGAAGGAGCCATCCGCCTCCCCCTACGCCGGTGACCCCACAGCCGGAGATCACGGCCAATCGATTCGTCTATCCCGCTGCTCCGCCCTACCCATCACAATTCGCAAACTCGAATCCTCCGCCGTATTACCAGTACCCAGGTTACTATCCCCCACCGCCAACGACCGTGCCGGTTCCTCTGCCACCACCTTACGATCAACATCATCGTATGGGTCCTCATCCACCTACGGACCCAGCATGGATGGGCGGACGTTACCCTTGTGGCCCTGTGATGCCTCCTACGCCCTATGTGGAGCATCAGAAGGCGGTCACGATAAGGAACGATGTTAATATAAAGAAGGAGACTCTGAGGGTTGAGCCCGATGAGGAAAATCCGGGGCGGTTCCTTGTGGCATTCACATTCGATGCCACTGTGGCCGGGAGCATCACCATACTTTTCTTTGCAAAGGAAGGTGAGGGCTGCATTCTTAGGCCGACAATGGAAAACCTTCTAGCACCTGTAACTGTGCACTTCGAACAAGGTCTTGGCCAGAAGTTTAGGCAGCCAGCTGGAACTGGTATAGACTTATCAATATTTGAAGAGTCGGAACTATTAAGAAGTGACAATGATGTCTACCCTCTAGCAGTGAAGGCAGATGCATCCTCTGGTAATCATGAAGGATCAAATGAAACTCTTACACCCGTTGCCACAAACTCTCAGATCACCCAAGCGGTCTTTGAGAAAGAGAAAGGAGAGTTCAGGGTGAGGGTAATTAAGCAGATCTTGTGGGTGAATGGAATGAGATATGAGTTGCAGGAGATATATGGTATTGGAAACTCAGTGGAGAATGACTTGGATGGAAATGATCCAGGAAAAGAGTGTGTCATCTGCTTATCGGAGCCTCGGGATACAACTGTTCTTCCCTGTCGACACATGTGCATGTGTAGCGGATGTGCGAAGGTTCTGAGGTTCCAGACAAACAGGTGCCCAATTTGCAGACAGCCAGTCGAGAGGCTTTTGGAGATAAAAGTCAACAACGGGCCTGAAGATACGACTCCTGAAGATACGACTCAAGCGGGTCAAGATAGCTGTACAGTATAA 1140 0.5053 MGNIGSSGANNNRRRHSASGRRSHPPPPTPVTPQPEITANRFVYPAAPPYPSQFANSNPPPYYQYPGYYPPPPTTVPVPLPPPYDQHHRMGPHPPTDPAWMGGRYPCGPVMPPTPYVEHQKAVTIRNDVNIKKETLRVEPDEENPGRFLVAFTFDATVAGSITILFFAKEGEGCILRPTMENLLAPVTVHFEQGLGQKFRQPAGTGIDLSIFEESELLRSDNDVYPLAVKADASSGNHEGSNETLTPVATNSQITQAVFEKEKGEFRVRVIKQILWVNGMRYELQEIYGIGNSVENDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNNGPEDTTPEDTTQAGQDSCTV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1724 379 FunFam probable E3 ubiquitin-protein ligase LOG2 291 356 - -
Lele14g1724 379 MobiDBLite consensus disorder prediction 358 379 - -
Lele14g1724 379 PANTHER MAHOGUNIN 1 362 IPR045194 GO:0061630
Lele14g1724 379 SMART ring_2 307 345 IPR001841 -
Lele14g1724 379 Pfam Zinc finger, C3HC4 type (RING finger) 305 351 - -
Lele14g1724 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 356 IPR013083 -
Lele14g1724 379 ProSiteProfiles Zinc finger RING-type profile. 307 346 IPR001841 -
Lele14g1724 379 SUPERFAMILY RING/U-box 306 352 - -
Lele14g1724 379 MobiDBLite consensus disorder prediction 362 379 - -
Lele14g1724 379 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 306 346 IPR045195 -
Lele14g1724 379 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1724 Lele-ChrLele14 24465010 24467529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1724 103 326 C3H Transcription Factor Family AT3G09770 65.086 1.70e-101 302