Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1721 ATGCAAATCCTCTGTGCTCATAGCTTCCGAGGGGTTTCTTCTATCTTTCTTCAGCTTCTGCTCTTCCTGTTCTCATATTGCGCATATGGGTTTGGGACGATGGGGCCAATATCGGCCTCATTTGGTAAATATGAATTCTTCTGCGCAATCGATGCAAGCGGGAAGCAGGATGTCATTTGCTGGGGGAGGAACATCACTTCATCGGTTCCACCGTCTTCTTCAGCTTCAGCCTCTGTTACTGACAGCCCTCCCATGGCATCTTTATCCGGTGGCGAAGGATTTATGTGTGGCATTCTAGCAAGCACTTCGCAAGCATACTGCTGGAGCGCCACAAAGCCAGCGATAGATCTTGTGCCTCCTCAATACCAATCCTATGCTTATTCTCAAATAGCAGCAGGCAAGAATCACGTTTGTGCCATCAGGGGATATTATTATTCTAATGAAGATTCCGGAATTATTGATTGTTGGGAAATTGTGAGAACTGCGGACAACAGCTTAAAATGGAAACAGAGCGATTTGTATTACGATCAGTCAACTAGCAATCTTGCATTAAACAAAGTTGTAGCAGGTGAGGGATTCGCTTGTGGTGCGGTCAGAGACGGAGGGCTTGTCTGTTGGGGACCTACATCCGCGAGCTTAGGGGTATCGAATGTGTCCGAGAACTTCTCAGTCTTGGTTTCTGGAAGGAGCTCAATTTGTGGGCTTTTGAACGTTTCTGGAGATTTGAAATGTTGGGGCGATGCAGATTCGTTTGCTGATCCACCTGATGGGGTTGGATTAGTCTCTCTGTCAGCTGGGGCTCGCCATTATTGTGGTATCCGAGCAGATAATCATATAGTGGAGTGTTGGGGGAGTTTCAATTCGTCTGTGGTTCCAAAAGGTTCTGGATTTATGGCAATCGCTTCTTCAGATTATACAACTTGTGGCGTTAGAGAGGAAGATCTTCTGATTGATTGCTGGTTGGTGAATGCGTCCACGGCCGAGTTTGATTCTCCATTGGAATTATCAAGTCCAGGTCTCTGCAGTTCCAATTCATGCAATCAAGGTGAGTTTGCTTTCAATGTTAGTGTTCTAAATGAGCCAGGTTTAACAAACCTCTGCGTTCGAAAAGATTTAAGGATCTGTTCGCCCTGTGGCTCAAATTGTTCAGAAGGCTTTTTCTTGTCCAGTCCATGCACTGATAATTCCGACAGGGTATGCACTGCTTGTTCTCTTTGCCAAAACAGCTCCTGCTGGGATGCTTGTCGACTTGAGTCATCTCCAGATATTGTTCATAAGAAAAGCTGGCACCATTTGCGTAGATTGCTGATCATAATTGGGTCAGCTACTTTGGGATTCATGTTTATCATTACTTGTGGTTGTATTCTTCCATGTTTGATCGGTAAGAAAGAATCCAAATCTGGCACGGCCAAACAAGAGCAGCAAGTTGATCTTAATGTTGATCTTCATTCTTTTCCTTCTACAACTTCCTGTCCTGGGATGCCTCAGATTTTCCGACTCTCAGAGCTAAAGGATGCCACTAATGGATTCAAGGAATTCAACGAGCTTGGTAGAGGAAGTTATGGCTTTGTATACAAAGCTGTATTAGCAGATGGCAGGGTAGTTGCAGTGAAGAGGGCCAATGCTGCCACAATTATCCACACAAACAATCGTGACTTTGAAATGGAACTGGAAATCCTCTGCAAAATCCGTCACGGTAATATCGTCAATTTGTTGGGTTACTGTGCAGAGATGGGAGAGAGGCTTCTTGTTTACGAGTATATGCCACATGGCACTCTTTATGATCACCTTCATGGTGGACTTTCTCCTCTGAATTGGAGCCTCAGGCTAAAGATATCAATGCAAACTGTTAAAGCTCTTGAGTATCTGCAAAAGGAACTAGCCCCACCAATTGTGCATAAGGATGTTAAAAGTGCAAACATTCTCTTGGATTCTGAATGGGGAGCGAGAATGTCAGACTTTGGACTCCTCACTTCTGGAGACAAAGATCAAAATGGGGATGTACAGAGCGATGTTTATAACTTTGGGATCGTGTTGCTTGAGATTCTTAGTGGAAGAAAAGCTTATGACGGAGATTTCGTGCCTCCCAACATAGTTGATTGGGCGGTGCCTCTGATCAAACAGGGGAAAGCTGCTGCCATAATTGATCGCTCTGTACCTCTTCCAAGGATTGTTGAGCCATTGCTGAAGCTAACTGATATTGCAGAGCTTGCTGTTAGACACAATCCCAGCGAGCGTCCCGCTATGTCAGAGATAGCATCTTGGTTGGAGCAGATTGTGAAGGACGGTTTGATCTTATAG 2301 0.4485 MQILCAHSFRGVSSIFLQLLLFLFSYCAYGFGTMGPISASFGKYEFFCAIDASGKQDVICWGRNITSSVPPSSSASASVTDSPPMASLSGGEGFMCGILASTSQAYCWSATKPAIDLVPPQYQSYAYSQIAAGKNHVCAIRGYYYSNEDSGIIDCWEIVRTADNSLKWKQSDLYYDQSTSNLALNKVVAGEGFACGAVRDGGLVCWGPTSASLGVSNVSENFSVLVSGRSSICGLLNVSGDLKCWGDADSFADPPDGVGLVSLSAGARHYCGIRADNHIVECWGSFNSSVVPKGSGFMAIASSDYTTCGVREEDLLIDCWLVNASTAEFDSPLELSSPGLCSSNSCNQGEFAFNVSVLNEPGLTNLCVRKDLRICSPCGSNCSEGFFLSSPCTDNSDRVCTACSLCQNSSCWDACRLESSPDIVHKKSWHHLRRLLIIIGSATLGFMFIITCGCILPCLIGKKESKSGTAKQEQQVDLNVDLHSFPSTTSCPGMPQIFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHGNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKISMQTVKALEYLQKELAPPIVHKDVKSANILLDSEWGARMSDFGLLTSGDKDQNGDVQSDVYNFGIVLLEILSGRKAYDGDFVPPNIVDWAVPLIKQGKAAAIIDRSVPLPRIVEPLLKLTDIAELAVRHNPSERPAMSEIASWLEQIVKDGLIL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1721 766 SUPERFAMILY RCC1/BLIP-II 37 288 IPR009091 -
Lele14g1721 766 SUPERFAMILY Protein kinase-like (PK-like) 484 757 IPR011009 -
Lele14g1721 766 Gene3D Transferase(Phosphotransferase) domain 1 588 665 - -
Lele14g1721 766 Gene3D Transferase(Phosphotransferase) domain 1 666 763 - -
Lele14g1721 766 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Lele14g1721 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Lele14g1721 766 Gene3D Phosphorylase Kinase; domain 1 471 587 - -
Lele14g1721 766 FunFam Serine/threonine-protein kinase-like protein CCR1 665 763 - -
Lele14g1721 766 Pfam Protein tyrosine and serine/threonine kinase 514 664 IPR001245 GO:0004672|GO:0006468
Lele14g1721 766 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 345 400 IPR001368 GO:0005515
Lele14g1721 766 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 14 760 - -
Lele14g1721 766 Gene3D - 179 336 IPR009091 -
Lele14g1721 766 Gene3D - 30 178 IPR009091 -
Lele14g1721 766 SMART serkin_6 510 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1721 766 FunFam serine/threonine-protein kinase-like protein CCR1 479 587 - -
Lele14g1721 766 ProSiteProfiles Protein kinase domain profile. 510 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1721 Lele-ChrLele14 24454753 24457053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1721 15 758 Receptor kinase-like Gene Family AT3G59420 30.873 2.13e-110 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele14g1721 PK_Tyr_Ser-Thr 1.7e-28 CL0016