Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1720 ATGCAGGCCAGGGTCTGTTATGACTCATCAGCAATGCAGAAGCATAGCATGAGTAAGAATGTCGTCTCTCACTTCATTTCCAGTGAAAATTCTGCCCAGTCTTTGGAGAACAGGATGATAAGAAGACGCCCCACCTTAAGCTTTTTGGGGAAAAAATTCTTCCCGGAAAGCAGATCTCGACGAGCTACGCTCATGACACCGTCTCCCAAGTTTTCACTCGCAATAGTTCATTACATGGAAATGCTCATAAAGGGGCCAATTTATTTTGATGCTAGTTCGCTGGCTCTGAAGATCGGTCCACTGGGTCTTTCTCCAAAGAAGATCGGTGAAGACATCGCCAAGGAGACAGCAAAAGATTGGAAGGGTCTCCGTGTCACCGTGAAGCTGCCCGTTCAGAACAGGCAAGCCAAGGTGTCGGTGGTGCCGTTAGCCGCTGCGTTGGTTATCAAAGCCCTGACGGAGCCTGAAAGGGACCGTAAGAAGACAAAGAACATCAAGCACAACGGTAACATCTCACTCGACGACGTCATTGAGATTGCCAAAACCATGCGCCCCAGGTCCATGGCCAAGGATTTGAGTGGAACCGTTAAGGAGATTCTTGGAACTTGTGTTTTTGTTGGATGTTCTGTGTCTGAGCCATCTTATGTGATGCTCGCTTTTCGTTATACTGTGGTGCAGCTGTGTATGCTTGTGACTGACTATACCCAATCTCTTCCAGAACTCCTAATCAGTGAGGTATTGGCCCAGTTCTTGATAGACAGGAGTCATCGAGTTTCCTCGATCTTTCTTCTGTCTTCTGCTTCGTCTAAATCTAGTCACGAACAAAACCACCATAGAATGGCATCCAACAGGGGTCAGGGCGGAATTCAGCAGCTATTGGCTGCAGAACAAGAAGCTCAACGGATTGTAAATGCTGCGAGAAATGAAAAAATGGCAAGGCTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGAATATCGTGCTCAGGTGGAGTATGAATTCCAAAAGAAATTGGCAGAGAGCAGTGGAGATTCCGGTGCTAATGTGAAGCGGCTTGAGCAAGAGACTGAAACAAAGATCCAGCACCTGCAAACAGAAGCATCAAGAATATCGCAAGATGTTGTTGCCATGCTCCTCAAGCATGTGACAAGTGTGAAAAATTAG 1170 0.4667 MQARVCYDSSAMQKHSMSKNVVSHFISSENSAQSLENRMIRRRPTLSFLGKKFFPESRSRRATLMTPSPKFSLAIVHYMEMLIKGPIYFDASSLALKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLPVQNRQAKVSVVPLAAALVIKALTEPERDRKKTKNIKHNGNISLDDVIEIAKTMRPRSMAKDLSGTVKEILGTCVFVGCSVSEPSYVMLAFRYTVVQLCMLVTDYTQSLPELLISEVLAQFLIDRSHRVSSIFLLSSASSKSSHEQNHHRMASNRGQGGIQQLLAAEQEAQRIVNAARNEKMARLKQAKEEAEKEIAEYRAQVEYEFQKKLAESSGDSGANVKRLEQETETKIQHLQTEASRISQDVVAMLLKHVTSVKN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1720 389 Pfam Ribosomal protein L11, N-terminal domain 91 135 IPR020784 -
Lele14g1720 389 Pfam Ribosomal protein L11, RNA binding domain 141 210 IPR020783 GO:0003735|GO:0005840|GO:0006412
Lele14g1720 389 SUPERFAMILY Ribosomal protein L11, C-terminal domain 142 211 IPR036769 -
Lele14g1720 389 Hamap 50S ribosomal protein L11 [rplK]. 75 212 IPR000911 GO:0003735|GO:0005840|GO:0006412
Lele14g1720 389 Pfam Vacuolar (H+)-ATPase G subunit 286 388 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele14g1720 389 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 280 389 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele14g1720 389 Coils Coil 289 338 - -
Lele14g1720 389 Gene3D - 149 221 IPR036769 -
Lele14g1720 389 CDD Ribosomal_L11 91 210 IPR000911 GO:0003735|GO:0005840|GO:0006412
Lele14g1720 389 Gene3D - 62 148 IPR036796 -
Lele14g1720 389 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 68 152 IPR036796 -
Lele14g1720 389 SMART rl11c 79 211 IPR000911 GO:0003735|GO:0005840|GO:0006412
Lele14g1720 389 Gene3D - 279 389 - -
Lele14g1720 389 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 285 388 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele14g1720 389 FunFam V-type proton ATPase subunit G 282 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1720 Lele-ChrLele14 24443502 24450784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1720 91 211 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 87.603 4.45e-70 216