Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1719 ATGGAAATGGAGGGTGAGATGAGGCAGTCAAGATTTAAGAGGATCTGCGTCTTCTGTGGGAGCAGCCAGGGCAAGAAGAGTAGCTATCAAGATGCCGCCATTGAGCTTGGCAAGGAATTGGTCTCAAGGAACATCGATTTGGTGTATGGAGGGGGAAGCATTGGTCTTATGGGTTTGGTTTCACAAGCAGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTCACTGGCCAAACAGTGGGAGAAGTGAAAGCAGTGGCAGATATGCATCAAAGGAAGGCAGAGATGGCTAGGCACTCAGATGCTTTTATCGCCTTACCAGGAGGCTATGGGACTCTTGAGGAGCTTCTTGAAGTCATAACATGGGCTCAGCTTGGGATACATGACAAACCGGTGGGGTTACTAAATGTTGACGGATACTACAACTCTTTGCTATCGTTTGTTGACAAAGCTGTGGAAGAGGGATTCGTTAATCCAAATGCCCGCCACATAATTGTTTCAGCACCAACACCAAAAGAATTGGTGAAGCAATTGGAGGAATATATTCCCTGTCACGAAAGTGTGGCTTCCAAGCTGAGCTGGAAGATGGAAAAGATGAGTTATGGTCAAGAGTATGGTAAAATTAGTGGGAAACAAAATGCTGAGATTCGTAGGGATTCTATCTCCTCGCCTAGCAATGGCAGGGTCCACCTGGGTTCCAGGCTCATGCTGATGCTTGATCCTGATTGGTGGAGGATCATTGCGAAAGTGAAAGCCGAAGCAGTTATTGAAGCTGCAAATCTTGCTGCTAATGGACAACCCTTTGAGATGGCTTTCGAGACAGGGTATTCTTCACGGATAAGTTGGTTCGTGGGAACTATATCTTCGGTGGAGGTTGCCGATCCTTTACTCTGGTCTAATTCACCACGGGGACTTCCCCAGGTAAAACACAAAGATTCACTCAACTTTCTCACCACCAAGGAAGAAAATGGGGTTGCCTCATCAGCATCCAGATGTTCCACTTGA 1032 0.4719 MEMEGEMRQSRFKRICVFCGSSQGKKSSYQDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGQTVGEVKAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFVDKAVEEGFVNPNARHIIVSAPTPKELVKQLEEYIPCHESVASKLSWKMEKMSYGQEYGKISGKQNAEIRRDSISSPSNGRVHLGSRLMLMLDPDWWRIIAKVKAEAVIEAANLAANGQPFEMAFETGYSSRISWFVGTISSVEVADPLLWSNSPRGLPQVKHKDSLNFLTTKEENGVASSASRCST 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1719 343 PANTHER LOG FAMILY PROTEIN YJL055W 5 213 - -
Lele14g1719 343 Gene3D - 3 189 - -
Lele14g1719 343 FunFam CASP-like protein 3 189 - -
Lele14g1719 343 SUPERFAMILY MCP/YpsA-like 11 190 - -
Lele14g1719 343 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lele14g1719 343 Gene3D - 272 332 - -
Lele14g1719 343 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1719 Lele-ChrLele14 24434082 24438792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1719 258 317 B3 DNA Binding Superfamily AT4G30080 43.617 9.97e-13 67.4