Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1718 ATGTACCTGCAATCAACAACCATGAGGTTGGAAGAATGGAGAATAAGGAGGACAGATACAGAGAGATGGATGCGCCACAGGCAGCTACCTCATGATCTGAAGCAAAACGTTAGACTATACGAGCAATTCAGATGGGTTGCAACACGTGGAGTTGACGAGGAAGTCATTCTCAGAGACCTTCCTGCTGATCTCAGACGCGACATTAAACGTCACCTCTGCGTCAACCTAGTCCGACAAGTACCACTATTTGATCAGATGGACGAGAGGATGTTGGCCGCGATATGCGAAAGGCTGAAGCCATCTCTGTGCACTCCAGGGACAAGGCTAGTTCGTGAAGGTGACCCTGTGAATGAGATGCTCTTCATAGTTCGAGGTCGTTTGGATTCATTTACGACCAACGGTGGCAGAAGTGGATTCTTCAATTCCTGCAGAATAGGGGCGGGTGATTTCTGTGGCGAAGAGCTCTTGCCGTGGGTTCTGGACCCTCGTCCTAGTGCGGTTCTTCCTACATCAACTCGCACAGTGAAAGCCATAACCCACGTCGAAGCTTTTGCACTCATAGCCGAGGACTTGCAGTTCGTGGCAGACCAGTTCCGGAGGCTACACAGTAAACAATTAAGGCACACTTTCAGGTTTTATTCTCAGCAATGGAGGACATGGGCTGCTTGCTTCATACAAGCGGCTTGGTTTAACTATAAGAGGAGAAGAGAGGCCAGTGAGCTCAAGAGGAAGCAGAATCACTTGGTTGCGACCTCTGTGCCAGAAGGTTATACCGCCATGGAATATTTCTCTGCACCTCTGCAACCCCACATGGAGTACTCCACTGTTCTTACAAGGTATCCTGTGAGAGGTGGGAGCTTGCGATATGGTTCTGATCTTGACATTCTTGGTTCGTTGAGAAAGCCTGTTGAACCTGACTTCACCATGGAAGATACCTGA 939 0.4909 MYLQSTTMRLEEWRIRRTDTERWMRHRQLPHDLKQNVRLYEQFRWVATRGVDEEVILRDLPADLRRDIKRHLCVNLVRQVPLFDQMDERMLAAICERLKPSLCTPGTRLVREGDPVNEMLFIVRGRLDSFTTNGGRSGFFNSCRIGAGDFCGEELLPWVLDPRPSAVLPTSTRTVKAITHVEAFALIAEDLQFVADQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWFNYKRRREASELKRKQNHLVATSVPEGYTAMEYFSAPLQPHMEYSTVLTRYPVRGGSLRYGSDLDILGSLRKPVEPDFTMEDT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1718 312 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 256 - -
Lele14g1718 312 Pfam Cyclic nucleotide-binding domain 105 192 IPR000595 -
Lele14g1718 312 ProSiteProfiles cAMP/cGMP binding motif profile. 82 178 IPR000595 -
Lele14g1718 312 SMART cnmp_10 82 213 IPR000595 -
Lele14g1718 312 CDD CAP_ED 82 213 IPR000595 -
Lele14g1718 312 SUPERFAMILY cAMP-binding domain-like 12 204 IPR018490 -
Lele14g1718 312 FunFam Cyclic nucleotide-gated ion channel 1 9 73 - -
Lele14g1718 312 FunFam Cyclic nucleotide-gated ion channel 1 80 198 - -
Lele14g1718 312 Gene3D Jelly Rolls 80 200 IPR014710 -
Lele14g1718 312 Gene3D Helix hairpin bin 9 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1718 Lele-ChrLele14 24425772 24426792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1718 2 310 Ion Channels AT2G28260 67.097 3.30e-143 416