Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1716 ATGTCTTCCTCTGCCGCTTCCTTGGCCCTTCCTACATTCTCCTCAAGGTTCCGCTCTCTATGCTTTGCCGGACAAGCCTTGTTCTCTCCCCATTCTGAATCTTTCTCGTCTCTCCGATTAAAATCGAAGCCCCTTTCTTTGTCTGCGTCTTTTCTTCCATTCCACACGCCTTCTACCTCTCGTTTTATCCCCAATGTTGCTCTTTCTTCTGATTTCGACCAAGAGATGGTGACTGATGAAGACGAGCCTAGCTACTCCCCTGACCTCAAACTCTTCGTCGGTAATCTTCCCTTCAGCGTTGACAGTGCCCAGCTTGCTGAATTGTTCGAGAGCGCTGGAACTGTCGAGATGGTTGAGGTAATTTATGATAAAATGACCGGAAGAAGCAGGGGATTTGGTTTTGTGACCATGTCCACATCTGGGGAAGTTGAAGCCGCCGCTCAACAATTCAATGGCTATGAACTTGATGGTCGGGCATTGAGAGTAAATTTTGGACCTCCTCCTCGGAAGGAGAATGGCCCTTTCAGAGGTTCCAGGGGTGGTTCTGCTGCAAATACTGGACATCGCGTTCATGTAGGTAATCTTGCATGGGGTGTTGATAACTTGGCGCTTGAGAATCTGTTTGCTGAGCAGGGAAAGGTTTTGGAAGCAAAGGTAATTTATGACAGAGAGAGTGGAAGGTCAAGAGGATTTGGCTTTGTGACTTACGGCAGTGCTGAAGAGGTCAACGGTGCTATTGAGTCCTTAGATGGTGTGGACTTGAATGGCAGATCTATTCGTGTGTCCTTAGCAGATGCTAAGCCAAGGCGTTCATTTTGA 819 0.4786 MSSSAASLALPTFSSRFRSLCFAGQALFSPHSESFSSLRLKSKPLSLSASFLPFHTPSTSRFIPNVALSSDFDQEMVTDEDEPSYSPDLKLFVGNLPFSVDSAQLAELFESAGTVEMVEVIYDKMTGRSRGFGFVTMSTSGEVEAAAQQFNGYELDGRALRVNFGPPPRKENGPFRGSRGGSAANTGHRVHVGNLAWGVDNLALENLFAEQGKVLEAKVIYDRESGRSRGFGFVTYGSAEEVNGAIESLDGVDLNGRSIRVSLADAKPRRSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1716 272 SUPERFAMILY RNA-binding domain, RBD 186 270 IPR035979 GO:0003676
Lele14g1716 272 MobiDBLite consensus disorder prediction 165 184 - -
Lele14g1716 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 188 266 IPR000504 GO:0003723
Lele14g1716 272 CDD RRM_HP0827_like 90 167 - -
Lele14g1716 272 SUPERFAMILY RNA-binding domain, RBD 83 185 IPR035979 GO:0003676
Lele14g1716 272 SMART rrm1_1 90 163 IPR000504 GO:0003723
Lele14g1716 272 SMART rrm1_1 189 262 IPR000504 GO:0003723
Lele14g1716 272 PANTHER OS02G0815200 PROTEIN 38 270 - -
Lele14g1716 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 89 167 IPR000504 GO:0003723
Lele14g1716 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 91 161 IPR000504 GO:0003723
Lele14g1716 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 191 260 IPR000504 GO:0003723
Lele14g1716 272 Gene3D - 69 184 IPR012677 -
Lele14g1716 272 Gene3D - 185 272 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1716 Lele-ChrLele14 24420635 24422403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1716 190 271 Eukaryotic Initiation Factors Gene Family AT1G49760 34.524 2.45e-08 52.8