Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1708 ATGAAGTGCTTTCCATTCCACTACGGACATAAGAAGGATGATCCGAAGAGCATTAAGTCAATTTCGGGTCTGTCCAACCTTTCCACATATGTCGAGGGTGATCTAAGAAGATCTGGCTCTGAATTAAATTCTCAGAATGCTTCCGATAATAGCACAGACTCCCTGAGGAGAACTTCGTTTCCCAGTTTGTCTCAAAGACCCAGCAACCTGAGAGTGTTTACGGTGTCTGAACTGAAATCGGCCACTAAAAATTTTGGCCGCACTGTTATGATTGGGGAGGGTGGGTTTGGCTGTGTCTACAAGGGAATGATCAAGAGTTTGGAGGACCCACCCAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGGGGAATGCAGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTGAAACTTGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGGTTTATGAATATTTGCCCAACAGAAGTGTGGAACACCATTTATCCCCCCGGTCAGAGATCCCTCTCTCATGGAGTAAGAGATTAAAAATAGCTCAGGATGCGGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCCAATATCCTTTTGGACGATCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCAAGATTGGGCCCATCTGAAGGGTTAACTCATGTCTCAACAGCGGTTGTTGGAACAATGGGATACGCAGCTCCTGAATATATTCAAACTGGACGTCTTACATCAAAAAGCGATGTGTGGAGTTATGGCGTATTTCTCTATGAACTCATCACTGGTCGGCGCCCTGTGGATCGAAATCGTCCCAAGGGTGAACAAAAGCTCTTGGAATGGGTAAGGCCGTACCTATCAGATGGGAAAAAATTTCAACTAATATTGGATCCAAGGCTTGACAGGAAACCCCTCATCAAGTCAGCACAGAGACTTGCCATTATAGCTAACGGATGCTTGGTCAAAAGCCCCAAGAATCGCCCAAAAATGAGTGAGGTATTGGAAATGGTGAATCGACTTGTAGAATCATCAACTGTCAGTAGTCCACAGATACCCTTGAAGAGTTCGGCATCCGCTGAAGTTCCCCACGGCACTGAAACAAAGAAAAAGAGAAGGATCATGGATCTAAAACCTGGAGAAAATAGTTGGTTTGTTTGGTTGTGGAGACCAAAGCTTTAA 1266 0.4384 MKCFPFHYGHKKDDPKSIKSISGLSNLSTYVEGDLRRSGSELNSQNASDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGMIKSLEDPPRKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYLPNRSVEHHLSPRSEIPLSWSKRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLIKSAQRLAIIANGCLVKSPKNRPKMSEVLEMVNRLVESSTVSSPQIPLKSSASAEVPHGTETKKKRRIMDLKPGENSWFVWLWRPKL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1708 421 Gene3D Transferase(Phosphotransferase) domain 1 171 385 - -
Lele14g1708 421 MobiDBLite consensus disorder prediction 36 63 - -
Lele14g1708 421 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Lele14g1708 421 Pfam Protein kinase domain 89 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1708 421 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1708 421 MobiDBLite consensus disorder prediction 377 398 - -
Lele14g1708 421 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Lele14g1708 421 CDD STKc_IRAK 91 369 - -
Lele14g1708 421 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Lele14g1708 421 FunFam Serine/threonine-protein kinase BIK1 51 170 - -
Lele14g1708 421 PANTHER OS01G0588500 PROTEIN-RELATED 48 368 - -
Lele14g1708 421 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1708 Lele-ChrLele14 24378879 24381041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1708 1 369 Glycoside Hydrolase AT3G07070 43.158 8.90e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele14g1708 Pkinase 7.3e-46 CL0016