Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1678 ATGGAGGATATCATTCAAGAGCAAGTTATGGTGGCGTGCAAGGATCAGGCACAATTCATGAAGGGCAAGCGTACCAAGAGTCATAGGCCACCCTCCCCACTAAGGCTCACCATAGCCATGCCGCCTTCTGCAACAGCCACCACCAATGACGCCTCTTCCGGCGGCTTCCACGTCGTCACAAACACGTCCTCATCTGAATTGAGGGATAGAAGTAGCACGCCTTCAACTACGACCCCGACCGAGGAAGAGGAGGACATGGCCAATTGTTTGATTCTTTTGGCTCGAAGCAAATTCTCGCACCCTAAGGATGGGGCATACCTTTACCAGTGCAAGACTTGTGATCGATCCTTCCGAGCTCTCGGCGGACACAGAGCCAGGCACAAGAAGATGAAGCCCAACCCAGAAAACAATGGTTACGACGATTGCTGCACCAGCACTGCTCTCTCCTTGCAAATATCGAATTGCGGGGTTTCTTTGTATGGCGCTAAATCATCGTCCAAAGTTCACGATTGTTCCATTTGTGGGGCTGAGTTCTCTTCTGGGCAAGCCTTGGGGGGTCACATGAGAAGGCACAGAGCTTCCGTGAAAGCCTCTGCAAGTACCACTATTACCAGCAGCCCCGAATCTCAAGACGTCAAGAAACCCAGAAACGTCTTTAAGTTGGACTTGAATCTTCCTGCCCCTCATGAAGATCATGATCACTCGGAATCCAAGTTTCCCTTTCACACCAAAGACTCTTTCCTCGTCTTCTCGGCGTCCACTTTGTTGGATTGTCACTACTGA 783 0.507 MEDIIQEQVMVACKDQAQFMKGKRTKSHRPPSPLRLTIAMPPSATATTNDASSGGFHVVTNTSSSELRDRSSTPSTTTPTEEEEDMANCLILLARSKFSHPKDGAYLYQCKTCDRSFRALGGHRARHKKMKPNPENNGYDDCCTSTALSLQISNCGVSLYGAKSSSKVHDCSICGAEFSSGQALGGHMRRHRASVKASASTTITSSPESQDVKKPRNVFKLDLNLPAPHEDHDHSESKFPFHTKDSFLVFSASTLLDCHY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1678 260 SMART c2h2final6 169 191 IPR013087 -
Lele14g1678 260 SMART c2h2final6 108 127 IPR013087 -
Lele14g1678 260 Pfam C2H2-type zinc finger 108 129 - -
Lele14g1678 260 Pfam C2H2-type zinc finger 168 193 - -
Lele14g1678 260 Gene3D Classic Zinc Finger 144 222 - -
Lele14g1678 260 MobiDBLite consensus disorder prediction 44 84 - -
Lele14g1678 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 196 IPR013087 -
Lele14g1678 260 PANTHER ZINC FINGER PROTEIN ZAT5 69 241 - -
Lele14g1678 260 MobiDBLite consensus disorder prediction 44 83 - -
Lele14g1678 260 SUPERFAMILY beta-beta-alpha zinc fingers 166 193 IPR036236 -
Lele14g1678 260 ProSitePatterns Zinc finger C2H2 type domain signature. 171 191 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1678 Lele-ChrLele14 24193977 24194759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1678 19 260 C2H2 Transcription Factor Family AT5G03510 38.062 1.09e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele14g1678 zf-C2H2_6 5.3e-12 CL0361