Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1674 ATGCTCGCCGGACAGCTCGCCGGCTTGCAGCCCCCGTTTCCACCTTCAGAAGCTATGGACATAGAGCATCCGGTTCGAGCTGAGAATCGACACTACCATGGGGATGGAACGTTCACGGTATTAGACGTTCTATTTGCCAACTCAAAGCCGGTAGTGGACAATTTTGGTTATGTTGCAGAAACGCCCATGGAAGAAAGATCAAGCCACCTTCTACGAGGAAGCTCCACATCATACGGTCACCGCCACCGACCTTTGCCCGCCGGGCTCCGAGAAGGGTGGTGCAATCCTCCAAAAGAGCACTTTGATTTAGCCAAATCTTCATTCACCAAGATCGCCACCGACTTCAAGGCCGGCGTCATCCCCGTCGAGTACCGCAGGGTACCGTGCAAGAAGACGGGAGGGATTAAATTGAAAATAACAGGGAATCCATACTACAAAGCGGTGTCGGTGTGGAATGTGGGAGGCGCCGGCGATGTGGTGGGCGTGCAGGTTGGACAGAAATGGGTGCTTAATGATAAGATAGAAGGAGCCGATTTGAGCTTTCCGTGTCCAAAACAAGCGATGCCCAGGTCGTCACCTCGGCCTCTGTTTGTCCCGAGGGTTGGCAGTATGGTCAAACCTATGAAGCCCAAAACTTTGCTTAGACTTTAG 651 0.5269 MLAGQLAGLQPPFPPSEAMDIEHPVRAENRHYHGDGTFTVLDVLFANSKPVVDNFGYVAETPMEERSSHLLRGSSTSYGHRHRPLPAGLREGWCNPPKEHFDLAKSSFTKIATDFKAGVIPVEYRRVPCKKTGGIKLKITGNPYYKAVSVWNVGGAGDVVGVQVGQKWVLNDKIEGADLSFPCPKQAMPRSSPRPLFVPRVGSMVKPMKPKTLLRL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1674 216 PRINTS Expansin signature 91 108 IPR002963 GO:0009664
Lele14g1674 216 PRINTS Expansin signature 133 145 IPR002963 GO:0009664
Lele14g1674 216 PRINTS Expansin signature 145 166 IPR002963 GO:0009664
Lele14g1674 216 Pfam Expansin C-terminal domain 135 168 IPR007117 -
Lele14g1674 216 PANTHER EXPANSIN-A15 91 169 IPR002963 GO:0009664
Lele14g1674 216 SUPERFAMILY Barwin-like endoglucanases 91 152 IPR036908 -
Lele14g1674 216 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 86 134 IPR007112 -
Lele14g1674 216 Gene3D - 89 130 IPR036908 -
Lele14g1674 216 SMART dpbb_1 37 124 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1674 Lele-ChrLele14 24170111 24171618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1674 93 181 Expansin Gene Family AT5G39290 49.515 1.00e-27 104