Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1668 ATGGGATTTAACAGAATCATCTTCTGGCTACTGGCCTTTTTCACCTTTTCCCTTTCCATCATCATTGTCTGTCATTACACGCCAGCTTCGCTCACCGCCATCTCTTCCATCATTCCTCAAAGTAATTTCAAGCAACCTGTGATCTTTAGTAGGATTATAAAGCTCATTGGCGCTGAAGACTTTGTGTTTCTAATAACCAGAGTTGCGAGGAGGCTTCACCGCGGAAGGAACCACGAGGAAAAATGTGATGAGGCCACTTGGGATTCTGATCTTATTTCGGACTACAATGTGAGTCTTGTTTTAACTGTTAGCCTAAAGGGTTGTGGAAATTTTAGCAGCATACAAAAAGCAGTGAACGCTGTTCCTGAATCGAGGTCTGATAAAACTCTCATCATTGTTGATTCTGGCGTATACAGAGAGAAGGTAGCGGTGGAAGCATGCAAAACAAACTTGATATTGCAAGGTCGAGGATATCTGAACACAATCATAGAATGGAATGATACTGCCAATTCTACAGGAGGGACCTTTAATAGTTACTCAGTTGGAGTCTTTGCTTCTAAGTTTCTTGCTTACAACATTAGTTTTAAAAACACGGCTCCAGCACCATCACCGGGTATGATAGGAGCACAAGCAGTGGCGCTAAGAGTGAGTGGCGACGAAGCAGCATTCTATGGATGCGGAATGTATGGTGCTCAGGACACCCTCAATGATGATAATGGAAGACATTACTTCAAAGAATGTTTCATCCAAGGATCTATTGATTTCATATTTGGAAATGCTAGATCTCTTTATGAGGATTGTAGCATAAACTCTATAGCAACAGACCAAGGGGCTATGATTACTGGCTCCATCACAGCTCAATCGAGACAACCAAAGGATGACGAAAGTGGGTTTTCGTTTGTGAATTGTAAGATTGAAGGAAGAGGAAAAGTATGGCTTGGAAGAGCATGGGGAGCATATGCCACTGTTGTCTTCTCCACAACATATATGTCTGATGTTGTAGCTCCTGAAGGATGGAATGATTGGTCTAATTTCACAAGAGACGAGACTGTCTTTTTTGGGGAATATCATTGTCTTGGAAATGGAGCCAACTACTCTTCTAGAGTCTCATATGGAAGGCAACTTAAAGACTACGAAGCCGCCCGTTTCATGAATATTTCATATATTGATGGAAATGGCTGGCTTCTTAATTATAAAAAGTAG 1203 0.4156 MGFNRIIFWLLAFFTFSLSIIIVCHYTPASLTAISSIIPQSNFKQPVIFSRIIKLIGAEDFVFLITRVARRLHRGRNHEEKCDEATWDSDLISDYNVSLVLTVSLKGCGNFSSIQKAVNAVPESRSDKTLIIVDSGVYREKVAVEACKTNLILQGRGYLNTIIEWNDTANSTGGTFNSYSVGVFASKFLAYNISFKNTAPAPSPGMIGAQAVALRVSGDEAAFYGCGMYGAQDTLNDDNGRHYFKECFIQGSIDFIFGNARSLYEDCSINSIATDQGAMITGSITAQSRQPKDDESGFSFVNCKIEGRGKVWLGRAWGAYATVVFSTTYMSDVVAPEGWNDWSNFTRDETVFFGEYHCLGNGANYSSRVSYGRQLKDYEAARFMNISYIDGNGWLLNYKK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1668 400 FunFam Pectinesterase 95 400 - -
Lele14g1668 400 ProSitePatterns Pectinesterase signature 2. 249 258 IPR033131 -
Lele14g1668 400 Gene3D - 95 399 IPR012334 -
Lele14g1668 400 Pfam Pectinesterase 102 392 IPR000070 GO:0030599|GO:0042545
Lele14g1668 400 SUPERFAMILY Pectin lyase-like 98 395 IPR011050 -
Lele14g1668 400 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 91 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1668 Lele-ChrLele14 24128279 24130062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1668 94 395 Carbohydrate Esterase AT1G05310 53.443 5.33e-116 342